RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 TATP17735 454 aaPredicted RBP19.22■□□□□ 0.67
SF3A2-201ENST00000221494 PIP4K2BP78356 416 aa19.22■□□□□ 0.67
SF3A2-201ENST00000221494 MEIS3Q99687 375 aa19.22■□□□□ 0.67
SF3A2-201ENST00000221494 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
SF3A2-201ENST00000221494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.67
SF3A2-201ENST00000221494 STAP2Q9UGK3 403 aa19.22■□□□□ 0.67
SF3A2-201ENST00000221494 SOS1Q07889 1333 aaPredicted RBP19.21■□□□□ 0.67
SF3A2-201ENST00000221494 FAM208AQ9UK61 1670 aaKnown RBP19.21■□□□□ 0.67
SF3A2-201ENST00000221494 C1orf141Q5JVX7 400 aa19.21■□□□□ 0.67
SF3A2-201ENST00000221494 MEGF6O75095 1541 aa19.21■□□□□ 0.67
SF3A2-201ENST00000221494 LRRC37A3O60309 1634 aa19.21■□□□□ 0.67
SF3A2-201ENST00000221494 MPRIPQ6WCQ1 1025 aa19.21■□□□□ 0.67
SF3A2-201ENST00000221494 MYRIPQ8NFW9 859 aa19.21■□□□□ 0.67
SF3A2-201ENST00000221494 FAM13BQ9NYF5 915 aa19.21■□□□□ 0.67
SF3A2-201ENST00000221494 PLEKHG2Q9H7P9 1386 aa19.2■□□□□ 0.66
SF3A2-201ENST00000221494 PXDNLA1KZ92 1463 aa19.2■□□□□ 0.66
SF3A2-201ENST00000221494 SMARCA5O60264 1052 aaPredicted RBP19.2■□□□□ 0.66
SF3A2-201ENST00000221494 GTF2F1P35269 517 aaKnown RBP eCLIP19.2■□□□□ 0.66
SF3A2-201ENST00000221494 PTMAP06454 111 aaKnown RBP19.19■□□□□ 0.66
SF3A2-201ENST00000221494 TOM1L2Q6ZVM7 507 aa19.19■□□□□ 0.66
SF3A2-201ENST00000221494 UBAP1LF5GYI3 381 aa19.19■□□□□ 0.66
SF3A2-201ENST00000221494 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
SF3A2-201ENST00000221494 GNAI2P04899 355 aa19.19■□□□□ 0.66
SF3A2-201ENST00000221494 PIBF1Q8WXW3 757 aa19.19■□□□□ 0.66
SF3A2-201ENST00000221494 NSFL1CQ9UNZ2 370 aaKnown RBP19.19■□□□□ 0.66
SF3A2-201ENST00000221494 LARP1Q6PKG0 1096 aaKnown RBP19.18■□□□□ 0.66
SF3A2-201ENST00000221494 CARD10Q9BWT7 1032 aa19.18■□□□□ 0.66
SF3A2-201ENST00000221494 LRRCC1Q9C099 1032 aa19.18■□□□□ 0.66
SF3A2-201ENST00000221494 SPG7Q9UQ90 795 aa19.18■□□□□ 0.66
SF3A2-201ENST00000221494 GNAI3P08754 354 aa19.17■□□□□ 0.66
SF3A2-201ENST00000221494 CCDC183Q5T5S1 534 aa19.17■□□□□ 0.66
SF3A2-201ENST00000221494 TPM3P06753 285 aa19.17■□□□□ 0.66
SF3A2-201ENST00000221494 MX1P20591 662 aa19.17■□□□□ 0.66
SF3A2-201ENST00000221494 CHMLP26374 656 aa19.17■□□□□ 0.66
SF3A2-201ENST00000221494 EVA1CP58658 441 aa19.17■□□□□ 0.66
SF3A2-201ENST00000221494 STRN4Q9NRL3 753 aa19.17■□□□□ 0.66
SF3A2-201ENST00000221494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.17■□□□□ 0.662e-15■■□□□ 11.7
SF3A2-201ENST00000221494 COL22A1Q8NFW1 1626 aaPredicted RBP19.17■□□□□ 0.66
SF3A2-201ENST00000221494 COL16A1Q07092 1604 aaPredicted RBP19.16■□□□□ 0.66
SF3A2-201ENST00000221494 CHMP4AQ9BY43 222 aa19.16■□□□□ 0.66
SF3A2-201ENST00000221494 BTG4Q9NY30 223 aa19.16■□□□□ 0.66
SF3A2-201ENST00000221494 RPAP1Q9BWH6 1393 aaPredicted RBP19.16■□□□□ 0.66
SF3A2-201ENST00000221494 PHKG2P15735 406 aa19.15■□□□□ 0.66
SF3A2-201ENST00000221494 OVOS2A0A0G2JMS6 1433 aa19.15■□□□□ 0.66
SF3A2-201ENST00000221494 TEFQ10587 303 aa19.15■□□□□ 0.66
SF3A2-201ENST00000221494 CCDC94Q9BW85 323 aaPredicted RBP19.15■□□□□ 0.66
SF3A2-201ENST00000221494 SPTLC3Q9NUV7 552 aa19.15■□□□□ 0.66
SF3A2-201ENST00000221494 CYP27B1O15528 508 aa19.14■□□□□ 0.65
SF3A2-201ENST00000221494 ATP6V1DQ9Y5K8 247 aa19.14■□□□□ 0.65
SF3A2-201ENST00000221494 SLC4A2P04920 1241 aa19.13■□□□□ 0.65
SF3A2-201ENST00000221494 IFNL2Q8IZJ0 200 aa19.13■□□□□ 0.65
SF3A2-201ENST00000221494 TCHHQ07283 1943 aa19.13■□□□□ 0.65
SF3A2-201ENST00000221494 ATP8B2P98198 1209 aa19.13■□□□□ 0.65
SF3A2-201ENST00000221494 HSPA4P34932 840 aa19.12■□□□□ 0.65
SF3A2-201ENST00000221494 UTP14CQ5TAP6 766 aaKnown RBP19.12■□□□□ 0.65
SF3A2-201ENST00000221494 RNF214Q8ND24 703 aa19.12■□□□□ 0.65
SF3A2-201ENST00000221494 PRDM4Q9UKN5 801 aa19.12■□□□□ 0.65
SF3A2-201ENST00000221494 PHLPP1O60346 1717 aa19.12■□□□□ 0.65
SF3A2-201ENST00000221494 UBE2HP62256 183 aa19.12■□□□□ 0.65
SF3A2-201ENST00000221494 BTBD11A6QL63 1104 aa19.11■□□□□ 0.65
SF3A2-201ENST00000221494 IL2RBP14784 551 aa19.11■□□□□ 0.65
SF3A2-201ENST00000221494 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
SF3A2-201ENST00000221494 USP48Q86UV5 1035 aa19.11■□□□□ 0.65
SF3A2-201ENST00000221494 ANO2Q9NQ90 1003 aa19.11■□□□□ 0.65
SF3A2-201ENST00000221494 KDM6AO15550 1401 aaPredicted RBP19.11■□□□□ 0.65
SF3A2-201ENST00000221494 APBB1O00213 710 aa19.1■□□□□ 0.65
SF3A2-201ENST00000221494 KCNQ3O43525 872 aa19.1■□□□□ 0.65
SF3A2-201ENST00000221494 CERKQ8TCT0 537 aa19.1■□□□□ 0.65
SF3A2-201ENST00000221494 NOLC1Q14978 699 aaKnown RBP eCLIP19.1■□□□□ 0.65
SF3A2-201ENST00000221494 ZCRB1Q8TBF4 217 aaKnown RBP19.1■□□□□ 0.65
SF3A2-201ENST00000221494 PALD1Q9ULE6 856 aa19.1■□□□□ 0.65
SF3A2-201ENST00000221494 ADAMTS7Q9UKP4 1686 aa19.09■□□□□ 0.65
SF3A2-201ENST00000221494 RAB11FIP3O75154 756 aa19.09■□□□□ 0.65
SF3A2-201ENST00000221494 FKBP5Q13451 457 aaPredicted RBP19.09■□□□□ 0.65
SF3A2-201ENST00000221494 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
SF3A2-201ENST00000221494 STK31Q9BXU1 1019 aa19.09■□□□□ 0.65
SF3A2-201ENST00000221494 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.09■□□□□ 0.65
SF3A2-201ENST00000221494 ADAMTS2O95450 1211 aa19.08■□□□□ 0.65
SF3A2-201ENST00000221494 COL14A1Q05707 1796 aaKnown RBP19.08■□□□□ 0.64
SF3A2-201ENST00000221494 ZSCAN22P10073 491 aaPredicted RBP19.08■□□□□ 0.64
SF3A2-201ENST00000221494 SLC52A2Q9HAB3 445 aa19.08■□□□□ 0.64
SF3A2-201ENST00000221494 RAD50Q92878 1312 aa19.07■□□□□ 0.64
SF3A2-201ENST00000221494 USP25Q9UHP3 1055 aa19.07■□□□□ 0.64
SF3A2-201ENST00000221494 PKD1L3Q7Z443 1732 aa19.06■□□□□ 0.64
SF3A2-201ENST00000221494 PCDH11XQ9BZA7 1347 aa19.06■□□□□ 0.64
SF3A2-201ENST00000221494 PCDH11YQ9BZA8 1340 aa19.06■□□□□ 0.64
SF3A2-201ENST00000221494 KDM4AO75164 1064 aa19.06■□□□□ 0.64
SF3A2-201ENST00000221494 DNTTIP2Q5QJE6 756 aaKnown RBP19.06■□□□□ 0.64
SF3A2-201ENST00000221494 CCDC30Q5VVM6 783 aa19.06■□□□□ 0.64
SF3A2-201ENST00000221494 DIAPH3Q9NSV4 1193 aa19.06■□□□□ 0.64
SF3A2-201ENST00000221494 EXOC6BQ9Y2D4 811 aa19.06■□□□□ 0.64
SF3A2-201ENST00000221494 NUTM2BA6NNL0 878 aaPredicted RBP19.05■□□□□ 0.64
SF3A2-201ENST00000221494 NUTM2EB1AL46 878 aaPredicted RBP19.05■□□□□ 0.64
SF3A2-201ENST00000221494 TRIM6-TRIM34B2RNG4 842 aa19.05■□□□□ 0.64
SF3A2-201ENST00000221494 GADD45BO75293 160 aaPredicted RBP19.05■□□□□ 0.64
SF3A2-201ENST00000221494 ADCY5O95622 1261 aa19.05■□□□□ 0.64
SF3A2-201ENST00000221494 FOXD4L5Q5VV16 416 aaPredicted RBP19.05■□□□□ 0.64
SF3A2-201ENST00000221494 NUTM2AQ8IVF1 878 aaPredicted RBP19.05■□□□□ 0.64
SF3A2-201ENST00000221494 NFATC2IPQ8NCF5 419 aa19.05■□□□□ 0.64
SF3A2-201ENST00000221494 FOXD4L4Q8WXT5 416 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms