RNA–Protein interactions for RNA: ENST00000217260.8

RSPO4-201, Transcript of R-spondin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO4, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-201ENST00000217260 TTC41PQ6P2S7 1318 aa22.15■■□□□ 1.14
RSPO4-201ENST00000217260 USP42Q9H9J4 1324 aaKnown RBP22.15■■□□□ 1.14
RSPO4-201ENST00000217260 GIGYF1O75420 1035 aaPredicted RBP22.14■■□□□ 1.13
RSPO4-201ENST00000217260 GLRX3O76003 335 aaKnown RBP22.14■■□□□ 1.13
RSPO4-201ENST00000217260 CLASRPQ8N2M8 674 aaKnown RBP22.14■■□□□ 1.13
RSPO4-201ENST00000217260 PHRF1Q9P1Y6 1649 aaKnown RBP22.14■■□□□ 1.13
RSPO4-201ENST00000217260 DYNC1I1O14576 645 aa22.14■■□□□ 1.13
RSPO4-201ENST00000217260 PROSER3Q2NL68 480 aa22.14■■□□□ 1.13
RSPO4-201ENST00000217260 ARHGEF25Q86VW2 580 aa22.14■■□□□ 1.13
RSPO4-201ENST00000217260 PXDNQ92626 1479 aa22.13■■□□□ 1.13
RSPO4-201ENST00000217260 MCM5P33992 734 aa22.13■■□□□ 1.13
RSPO4-201ENST00000217260 FOXD4L6Q3SYB3 417 aaPredicted RBP22.13■■□□□ 1.13
RSPO4-201ENST00000217260 FOXD4L3Q6VB84 417 aaPredicted RBP22.13■■□□□ 1.13
RSPO4-201ENST00000217260 SPG7Q9UQ90 795 aa22.13■■□□□ 1.13
RSPO4-201ENST00000217260 ALDH1L1O75891 902 aa22.13■■□□□ 1.13
RSPO4-201ENST00000217260 KSR2Q6VAB6 950 aa22.13■■□□□ 1.13
RSPO4-201ENST00000217260 RASEFQ8IZ41 740 aa22.13■■□□□ 1.13
RSPO4-201ENST00000217260 WDR33Q9C0J8 1336 aaKnown RBP22.12■■□□□ 1.13
RSPO4-201ENST00000217260 TTC14Q96N46 770 aa22.12■■□□□ 1.13
RSPO4-201ENST00000217260 NCAPD2Q15021 1401 aa22.12■■□□□ 1.13
RSPO4-201ENST00000217260 LMOD2Q6P5Q4 547 aa22.11■■□□□ 1.13
RSPO4-201ENST00000217260 ANKRD24Q8TF21 1146 aa22.11■■□□□ 1.13
RSPO4-201ENST00000217260 ORAI2Q96SN7 254 aa22.11■■□□□ 1.13
RSPO4-201ENST00000217260 PRAMEF22A3QJZ6 481 aa22.11■■□□□ 1.13
RSPO4-201ENST00000217260 CWF19L2Q2TBE0 894 aaKnown RBP22.11■■□□□ 1.13
RSPO4-201ENST00000217260 DIAPH3Q9NSV4 1193 aa22.11■■□□□ 1.13
RSPO4-201ENST00000217260 AK2P54819 239 aa22.1■■□□□ 1.13
RSPO4-201ENST00000217260 PA2G4Q9UQ80 394 aaKnown RBP22.1■■□□□ 1.13
RSPO4-201ENST00000217260 ECHDC1Q9NTX5 307 aa22.1■■□□□ 1.13
RSPO4-201ENST00000217260 CCDC39Q9UFE4 941 aa22.1■■□□□ 1.13
RSPO4-201ENST00000217260 GDPD2Q9HCC8 539 aa22.09■■□□□ 1.13
RSPO4-201ENST00000217260 CRYBG1Q9Y4K1 1723 aa22.09■■□□□ 1.13
RSPO4-201ENST00000217260 RUFY2Q8WXA3 655 aa22.09■■□□□ 1.13
RSPO4-201ENST00000217260 HDAC5Q9UQL6 1122 aa22.09■■□□□ 1.13
RSPO4-201ENST00000217260 HEG1Q9ULI3 1381 aa22.09■■□□□ 1.13
RSPO4-201ENST00000217260 IFIT2P09913 472 aaKnown RBP22.08■■□□□ 1.13
RSPO4-201ENST00000217260 ERC1Q8IUD2 1116 aa22.08■■□□□ 1.13
RSPO4-201ENST00000217260 SMAP1Q8IYB5 467 aaPredicted RBP22.08■■□□□ 1.13
RSPO4-201ENST00000217260 LARP6Q9BRS8 491 aaKnown RBP22.08■■□□□ 1.13
RSPO4-201ENST00000217260 LIMCH1Q9UPQ0 1083 aa22.08■■□□□ 1.13
RSPO4-201ENST00000217260 SASS6Q6UVJ0 657 aa22.08■■□□□ 1.13
RSPO4-201ENST00000217260 GPATCH3Q96I76 525 aa22.08■■□□□ 1.13
RSPO4-201ENST00000217260 HYPKQ9NX55 129 aa22.08■■□□□ 1.13
RSPO4-201ENST00000217260 OVOS2A0A0G2JMS6 1433 aa22.08■■□□□ 1.13
RSPO4-201ENST00000217260 RUFY3Q7L099 469 aa22.08■■□□□ 1.12
RSPO4-201ENST00000217260 ARID3AQ99856 593 aa22.08■■□□□ 1.12
RSPO4-201ENST00000217260 RPAP1Q9BWH6 1393 aaPredicted RBP22.07■■□□□ 1.12
RSPO4-201ENST00000217260 USP48Q86UV5 1035 aa22.07■■□□□ 1.12
RSPO4-201ENST00000217260 SYAP1Q96A49 352 aaPredicted RBP22.07■■□□□ 1.12
RSPO4-201ENST00000217260 CASTP20810 708 aaKnown RBP22.07■■□□□ 1.12
RSPO4-201ENST00000217260 GADD45BO75293 160 aaPredicted RBP22.06■■□□□ 1.12
RSPO4-201ENST00000217260 AXIN2Q9Y2T1 843 aa22.06■■□□□ 1.12
RSPO4-201ENST00000217260 CPA1P15085 419 aa22.06■■□□□ 1.12
RSPO4-201ENST00000217260 PTH1RQ03431 593 aa22.06■■□□□ 1.12
RSPO4-201ENST00000217260 LINS1Q8NG48 757 aa22.06■■□□□ 1.12
RSPO4-201ENST00000217260 GRM8O00222 908 aa22.05■■□□□ 1.12
RSPO4-201ENST00000217260 AACSQ86V21 672 aa22.05■■□□□ 1.12
RSPO4-201ENST00000217260 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.05■■□□□ 1.12
RSPO4-201ENST00000217260 SLIT3O75094 1523 aa22.05■■□□□ 1.12
RSPO4-201ENST00000217260 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
RSPO4-201ENST00000217260 TCHHQ07283 1943 aa22.05■■□□□ 1.12
RSPO4-201ENST00000217260 RNF214Q8ND24 703 aa22.04■■□□□ 1.12
RSPO4-201ENST00000217260 SUCLG2Q96I99 432 aa22.04■■□□□ 1.12
RSPO4-201ENST00000217260 DDX58O95786 925 aaKnown RBP22.04■■□□□ 1.12
RSPO4-201ENST00000217260 EVI5LQ96CN4 794 aa22.04■■□□□ 1.12
RSPO4-201ENST00000217260 ZSCAN22P10073 491 aaPredicted RBP22.03■■□□□ 1.12
RSPO4-201ENST00000217260 TSPY26PQ9H489 355 aa22.03■■□□□ 1.12
RSPO4-201ENST00000217260 DDX21Q9NR30 783 aaKnown RBP eCLIP22.03■■□□□ 1.12
RSPO4-201ENST00000217260 PRPF40BQ6NWY9 871 aaKnown RBP22.03■■□□□ 1.12
RSPO4-201ENST00000217260 KAZALD1Q96I82 304 aa22.03■■□□□ 1.12
RSPO4-201ENST00000217260 BICC1Q9H694 974 aaKnown RBP22.03■■□□□ 1.12
RSPO4-201ENST00000217260 SMC3Q9UQE7 1217 aa22.03■■□□□ 1.12
RSPO4-201ENST00000217260 STX6O43752 255 aa22.02■■□□□ 1.12
RSPO4-201ENST00000217260 JAKMIP1Q96N16 626 aaKnown RBP22.02■■□□□ 1.12
RSPO4-201ENST00000217260 SYT1P21579 422 aa22.02■■□□□ 1.12
RSPO4-201ENST00000217260 ADCK5Q3MIX3 580 aa22.02■■□□□ 1.12
RSPO4-201ENST00000217260 SASH1O94885 1247 aa22.01■■□□□ 1.11
RSPO4-201ENST00000217260 G3BP1Q13283 466 aaKnown RBP eCLIP22.01■■□□□ 1.11
RSPO4-201ENST00000217260 UTYO14607 1347 aa22.01■■□□□ 1.11
RSPO4-201ENST00000217260 PHF14O94880 888 aa22.01■■□□□ 1.11
RSPO4-201ENST00000217260 LARGE1O95461 756 aa22.01■■□□□ 1.11
RSPO4-201ENST00000217260 PTMAP06454 111 aaKnown RBP22.01■■□□□ 1.11
RSPO4-201ENST00000217260 TMEM87AQ8NBN3 555 aa22.01■■□□□ 1.11
RSPO4-201ENST00000217260 PODXL2Q9NZ53 605 aa22.01■■□□□ 1.11
RSPO4-201ENST00000217260 CNPY2Q9Y2B0 182 aa22.01■■□□□ 1.11
RSPO4-201ENST00000217260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.01■■□□□ 1.11
RSPO4-201ENST00000217260 VPS53Q5VIR6 699 aa22■■□□□ 1.11
RSPO4-201ENST00000217260 PDRG1Q9NUG6 133 aa22■■□□□ 1.11
RSPO4-201ENST00000217260 SIPA1L3O60292 1781 aaPredicted RBP22■■□□□ 1.11
RSPO4-201ENST00000217260 PDIA6Q15084 440 aa22■■□□□ 1.11
RSPO4-201ENST00000217260 EAF2Q96CJ1 260 aaPredicted RBP22■■□□□ 1.11
RSPO4-201ENST00000217260 ZNF142P52746 1687 aaPredicted RBP22■■□□□ 1.11
RSPO4-201ENST00000217260 KRT28Q7Z3Y7 464 aa22■■□□□ 1.11
RSPO4-201ENST00000217260 ZSWIM6Q9HCJ5 1215 aa22■■□□□ 1.11
RSPO4-201ENST00000217260 CYP46A1Q9Y6A2 500 aa22■■□□□ 1.11
RSPO4-201ENST00000217260 RIC3Q7Z5B4 369 aa21.99■■□□□ 1.11
RSPO4-201ENST00000217260 TM6SF1Q9BZW5 370 aa21.99■■□□□ 1.11
RSPO4-201ENST00000217260 CCDC8Q9H0W5 538 aaPredicted RBP21.99■■□□□ 1.11
RSPO4-201ENST00000217260 CCDC171Q6TFL3 1326 aa21.99■■□□□ 1.11
RSPO4-201ENST00000217260 SLC39A6Q13433 755 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms