RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 SIRT1Q96EB6 747 aa15.47■□□□□ 0.07
PCDHB4-201ENST00000194152 CPSF1Q10570 1443 aaKnown RBP15.47■□□□□ 0.07
PCDHB4-201ENST00000194152 LMBR1LQ6UX01 489 aa15.47■□□□□ 0.07
PCDHB4-201ENST00000194152 ZNF594Q96JF6 807 aaPredicted RBP15.47■□□□□ 0.07
PCDHB4-201ENST00000194152 RBM27Q9P2N5 1060 aaKnown RBP15.47■□□□□ 0.07
PCDHB4-201ENST00000194152 SMC3Q9UQE7 1217 aa15.47■□□□□ 0.07
PCDHB4-201ENST00000194152 AATKQ6ZMQ8 1374 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 HSP90AB4PQ58FF6 505 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 CCDC83Q8IWF9 413 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 NECAB1Q8N987 351 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 PREX1Q8TCU6 1659 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 PPP4R3BQ5MIZ7 849 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 ARHGEF25Q86VW2 580 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 DDX11Q96FC9 970 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 TBC1D2BQ9UPU7 963 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 PPLO60437 1756 aa15.46■□□□□ 0.07
PCDHB4-201ENST00000194152 GRM8O00222 908 aa15.46■□□□□ 0.06
PCDHB4-201ENST00000194152 LARP1Q6PKG0 1096 aaKnown RBP15.46■□□□□ 0.06
PCDHB4-201ENST00000194152 FMNL2Q96PY5 1086 aa15.46■□□□□ 0.06
PCDHB4-201ENST00000194152 PALD1Q9ULE6 856 aa15.46■□□□□ 0.06
PCDHB4-201ENST00000194152 PTMSP20962 102 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 KCNQ4P56696 695 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 KSR2Q6VAB6 950 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 RUFY2Q8WXA3 655 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 TMOD3Q9NYL9 352 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 ZCRB1Q8TBF4 217 aaKnown RBP15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 HDAC5Q9UQL6 1122 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 SUCLG2Q96I99 432 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 TMEM131LA2VDJ0 1609 aa15.45■□□□□ 0.06
PCDHB4-201ENST00000194152 MYOM1P52179 1685 aa15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 ZNF335Q9H4Z2 1342 aaPredicted RBP15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 TIMM10P62072 90 aa15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 ZNF830Q96NB3 372 aaPredicted RBP15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 BTG4Q9NY30 223 aa15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 DYNC1I1O14576 645 aa15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 HELBQ8NG08 1087 aaPredicted RBP15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 IQSEC3Q9UPP2 1182 aaPredicted RBP15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 SASS6Q6UVJ0 657 aa15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
PCDHB4-201ENST00000194152 ZC3H13Q5T200 1668 aaKnown RBP15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 SYAP1Q96A49 352 aaPredicted RBP15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 USP26Q9BXU7 913 aa15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 HYPKQ9NX55 129 aa15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 CHAF1AQ13111 956 aaPredicted RBP15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 ESYT1Q9BSJ8 1104 aa15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 CCDC24Q8N4L8 307 aa15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 CNNM1Q9NRU3 951 aa15.43■□□□□ 0.06
PCDHB4-201ENST00000194152 GOLIM4O00461 696 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 FAM89AQ96GI7 184 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 TRERF1Q96PN7 1200 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 SYCE3A1L190 88 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 HAND2P61296 217 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 TTLL7Q6ZT98 887 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 KIAA0232Q92628 1395 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 FAM182BQ5T319 152 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 CCDC129Q6ZRS4 1044 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 CHST3Q7LGC8 479 aa15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 CCDC94Q9BW85 323 aaPredicted RBP15.42■□□□□ 0.06
PCDHB4-201ENST00000194152 FAM227BQ96M60 508 aa15.41■□□□□ 0.06
PCDHB4-201ENST00000194152 ECHDC1Q9NTX5 307 aa15.41■□□□□ 0.06
PCDHB4-201ENST00000194152 CHMLP26374 656 aa15.41■□□□□ 0.06
PCDHB4-201ENST00000194152 CCDC57Q2TAC2 916 aa15.41■□□□□ 0.06
PCDHB4-201ENST00000194152 TMX3Q96JJ7 454 aa15.41■□□□□ 0.06
PCDHB4-201ENST00000194152 SLAIN2Q9P270 581 aa15.41■□□□□ 0.06
PCDHB4-201ENST00000194152 SLFNL1Q499Z3 407 aa15.41■□□□□ 0.06
PCDHB4-201ENST00000194152 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
PCDHB4-201ENST00000194152 H3BQV1 296 aa15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 GUCY1B3Q02153 619 aa15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 IFFO2Q5TF58 517 aa15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 CDK12Q9NYV4 1490 aaPredicted RBP15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 PRIM1P49642 420 aaKnown RBP15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 CCDC39Q9UFE4 941 aa15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 FAM184AQ8NB25 1140 aa15.4■□□□□ 0.06
PCDHB4-201ENST00000194152 ZBTB22O15209 634 aa15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 TFCP2Q12800 502 aa15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 ARHGEF28Q8N1W1 1705 aaKnown RBP15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 SLC4A8Q2Y0W8 1093 aa15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 KIF6Q6ZMV9 814 aa15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 IQSEC2Q5JU85 1478 aa15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 RRP12Q5JTH9 1297 aaKnown RBP15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 RBSNQ9H1K0 784 aa15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 MAP2P11137 1827 aaKnown RBP15.39■□□□□ 0.05
PCDHB4-201ENST00000194152 RICTORQ6R327 1708 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 TULP1O00294 542 aaPredicted RBP15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 IDH1O75874 414 aaKnown RBP15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 C17orf53Q8N3J3 647 aaPredicted RBP15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 LINS1Q8NG48 757 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 DDX21Q9NR30 783 aaKnown RBP eCLIP15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 RAB11FIP3O75154 756 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 CHGBP05060 677 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 SLC52A2Q9HAB3 445 aa15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
PCDHB4-201ENST00000194152 GNL2Q13823 731 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms