RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 CPS1P31327 1500 aa16.25■□□□□ 0.19
TNIP3-201ENST00000057513 PDE4CQ08493 712 aa16.25■□□□□ 0.19
TNIP3-201ENST00000057513 FLIIQ13045 1269 aa16.25■□□□□ 0.19
TNIP3-201ENST00000057513 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
TNIP3-201ENST00000057513 SOS1Q07889 1333 aaPredicted RBP16.25■□□□□ 0.19
TNIP3-201ENST00000057513 TMEM131LA2VDJ0 1609 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 USP27XA6NNY8 438 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 ME3Q16798 604 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 VPS53Q5VIR6 699 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 LARP1BQ659C4 914 aaKnown RBP16.24■□□□□ 0.19
TNIP3-201ENST00000057513 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 ZSCAN31Q96LW9 406 aaPredicted RBP16.24■□□□□ 0.19
TNIP3-201ENST00000057513 JAKMIP1Q96N16 626 aaKnown RBP16.24■□□□□ 0.19
TNIP3-201ENST00000057513 STK31Q9BXU1 1019 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 SH2B1Q9NRF2 756 aaPredicted RBP16.24■□□□□ 0.19
TNIP3-201ENST00000057513 ELP1O95163 1332 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 ZNF165P49910 485 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 FAM53CQ9NYF3 392 aa16.24■□□□□ 0.19
TNIP3-201ENST00000057513 FBXO38Q6PIJ6 1188 aa16.23■□□□□ 0.19
TNIP3-201ENST00000057513 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
TNIP3-201ENST00000057513 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
TNIP3-201ENST00000057513 DNAJC25Q9H1X3 360 aa16.23■□□□□ 0.19
TNIP3-201ENST00000057513 NCKAP5LQ9HCH0 1330 aa16.23■□□□□ 0.19
TNIP3-201ENST00000057513 RBM6P78332 1123 aaKnown RBP16.23■□□□□ 0.19
TNIP3-201ENST00000057513 ARHGEF10O15013 1369 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 TTC21AQ8NDW8 1320 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 GOLGA6L4A6NEF3 574 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 ERICH4A6NGS2 130 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 FOXO3O43524 673 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 SURF6O75683 361 aaKnown RBP16.22■□□□□ 0.19
TNIP3-201ENST00000057513 CDK11BP21127 795 aaKnown RBP16.22■□□□□ 0.19
TNIP3-201ENST00000057513 PTH1RQ03431 593 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 ARID5BQ14865 1188 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 RBM43Q6ZSC3 357 aaKnown RBP16.22■□□□□ 0.19
TNIP3-201ENST00000057513 LRRC8AQ8IWT6 810 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 ST7Q9NRC1 585 aa16.22■□□□□ 0.19
TNIP3-201ENST00000057513 ELF2Q15723 593 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 PRPF40BQ6NWY9 871 aaKnown RBP16.21■□□□□ 0.19
TNIP3-201ENST00000057513 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 TIGD1Q96MW7 591 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 USP44Q9H0E7 712 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 CLSTN2Q9H4D0 955 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 ZSWIM6Q9HCJ5 1215 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 DDX19AQ9NUU7 478 aaKnown RBP16.21■□□□□ 0.19
TNIP3-201ENST00000057513 TFIP11Q9UBB9 837 aaKnown RBP16.21■□□□□ 0.19
TNIP3-201ENST00000057513 NAP1L2Q9ULW6 460 aaPredicted RBP16.21■□□□□ 0.19
TNIP3-201ENST00000057513 CYP46A1Q9Y6A2 500 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 CCDC171Q6TFL3 1326 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 PTPN14Q15678 1187 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 NYAP1Q6ZVC0 841 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 RHPN1Q8TCX5 695 aa16.21■□□□□ 0.19
TNIP3-201ENST00000057513 SPATA32Q96LK8 384 aa16.2■□□□□ 0.18
TNIP3-201ENST00000057513 NRKQ7Z2Y5 1582 aa16.2■□□□□ 0.18
TNIP3-201ENST00000057513 DLC1Q96QB1 1528 aa16.2■□□□□ 0.18
TNIP3-201ENST00000057513 NR1I2O75469 434 aa16.2■□□□□ 0.18
TNIP3-201ENST00000057513 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
TNIP3-201ENST00000057513 TPCN1Q9ULQ1 816 aa16.2■□□□□ 0.18
TNIP3-201ENST00000057513 XRN1Q8IZH2 1706 aaKnown RBP16.2■□□□□ 0.18
TNIP3-201ENST00000057513 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
TNIP3-201ENST00000057513 WASLO00401 505 aaPredicted RBP16.19■□□□□ 0.18
TNIP3-201ENST00000057513 RAB11FIP3O75154 756 aa16.19■□□□□ 0.18
TNIP3-201ENST00000057513 CDC25BP30305 580 aa16.19■□□□□ 0.18
TNIP3-201ENST00000057513 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
TNIP3-201ENST00000057513 ERO1AQ96HE7 468 aa16.19■□□□□ 0.18
TNIP3-201ENST00000057513 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
TNIP3-201ENST00000057513 TM6SF1Q9BZW5 370 aa16.19■□□□□ 0.18
TNIP3-201ENST00000057513 ERBB3P21860 1342 aa16.18■□□□□ 0.18
TNIP3-201ENST00000057513 SKILP12757 684 aa16.18■□□□□ 0.18
TNIP3-201ENST00000057513 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
TNIP3-201ENST00000057513 HSP90AB2PQ58FF8 381 aa16.18■□□□□ 0.18
TNIP3-201ENST00000057513 ZNF446Q9NWS9 450 aa16.18■□□□□ 0.18
TNIP3-201ENST00000057513 TRMT1Q9NXH9 659 aaKnown RBP16.18■□□□□ 0.18
TNIP3-201ENST00000057513 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
TNIP3-201ENST00000057513 SLFNL1Q499Z3 407 aa16.17■□□□□ 0.18
TNIP3-201ENST00000057513 CCDC30Q5VVM6 783 aa16.17■□□□□ 0.18
TNIP3-201ENST00000057513 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
TNIP3-201ENST00000057513 CALCOCO1Q9P1Z2 691 aa16.17■□□□□ 0.18
TNIP3-201ENST00000057513 NPHP1O15259 732 aa16.17■□□□□ 0.18
TNIP3-201ENST00000057513 PDCP20941 246 aa16.17■□□□□ 0.18
TNIP3-201ENST00000057513 COL9A3Q14050 684 aaPredicted RBP16.17■□□□□ 0.18
TNIP3-201ENST00000057513 BICD2Q8TD16 824 aa16.17■□□□□ 0.18
TNIP3-201ENST00000057513 KIF1BPQ96EK5 621 aa16.17■□□□□ 0.18
TNIP3-201ENST00000057513 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
TNIP3-201ENST00000057513 NEMFO60524 1076 aa16.16■□□□□ 0.18
TNIP3-201ENST00000057513 SLU7O95391 586 aaKnown RBP16.16■□□□□ 0.18
TNIP3-201ENST00000057513 POLA2Q14181 598 aa16.16■□□□□ 0.18
TNIP3-201ENST00000057513 IQCB1Q15051 598 aa16.16■□□□□ 0.18
TNIP3-201ENST00000057513 PGBD1Q96JS3 809 aa16.16■□□□□ 0.18
TNIP3-201ENST00000057513 GOLGA6L19H0YKK7 550 aa16.16■□□□□ 0.18
TNIP3-201ENST00000057513 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
TNIP3-201ENST00000057513 KCNB2Q92953 911 aa16.16■□□□□ 0.18
TNIP3-201ENST00000057513 USP16Q9Y5T5 823 aa16.16■□□□□ 0.18
TNIP3-201ENST00000057513 MON2Q7Z3U7 1717 aa16.15■□□□□ 0.18
TNIP3-201ENST00000057513 SRGAP3O43295 1099 aa16.15■□□□□ 0.18
TNIP3-201ENST00000057513 PDIA4P13667 645 aaKnown RBP16.15■□□□□ 0.18
TNIP3-201ENST00000057513 CCZ1BP86790 482 aa16.15■□□□□ 0.18
TNIP3-201ENST00000057513 CCZ1P86791 482 aaPredicted RBP16.15■□□□□ 0.18
TNIP3-201ENST00000057513 NECTIN1Q15223 517 aa16.15■□□□□ 0.18
TNIP3-201ENST00000057513 LARP1Q6PKG0 1096 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms