RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TCEANC2Q96MN5 208 aa16.84■□□□□ 0.29
USH1C-201ENST00000005226 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
USH1C-201ENST00000005226 TTC21AQ8NDW8 1320 aa16.84■□□□□ 0.29
USH1C-201ENST00000005226 PDRG1Q9NUG6 133 aa16.83■□□□□ 0.29
USH1C-201ENST00000005226 ST3GAL1Q11201 340 aa16.83■□□□□ 0.28
USH1C-201ENST00000005226 BEND3Q5T5X7 828 aa16.83■□□□□ 0.28
USH1C-201ENST00000005226 PRDM10Q9NQV6 1147 aa16.83■□□□□ 0.28
USH1C-201ENST00000005226 MTMR6Q9Y217 621 aa16.83■□□□□ 0.28
USH1C-201ENST00000005226 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.83■□□□□ 0.28
USH1C-201ENST00000005226 KDM4AO75164 1064 aa16.83■□□□□ 0.28
USH1C-201ENST00000005226 UVSSAQ2YD98 709 aa16.83■□□□□ 0.28
USH1C-201ENST00000005226 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
USH1C-201ENST00000005226 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.83■□□□□ 0.28
USH1C-201ENST00000005226 ABTB2Q8N961 1025 aa16.82■□□□□ 0.28
USH1C-201ENST00000005226 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
USH1C-201ENST00000005226 PIBF1Q8WXW3 757 aa16.82■□□□□ 0.28
USH1C-201ENST00000005226 ME3Q16798 604 aa16.82■□□□□ 0.28
USH1C-201ENST00000005226 NALCNQ8IZF0 1738 aa16.81■□□□□ 0.28
USH1C-201ENST00000005226 CAMK4Q16566 473 aa16.81■□□□□ 0.28
USH1C-201ENST00000005226 FAM208AQ9UK61 1670 aaKnown RBP16.81■□□□□ 0.28
USH1C-201ENST00000005226 EIF4A1P60842 406 aaKnown RBP16.81■□□□□ 0.28
USH1C-201ENST00000005226 FAM227BQ96M60 508 aa16.8■□□□□ 0.28
USH1C-201ENST00000005226 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
USH1C-201ENST00000005226 PYCARDQ9ULZ3 195 aa16.8■□□□□ 0.28
USH1C-201ENST00000005226 MYRIPQ8NFW9 859 aa16.8■□□□□ 0.28
USH1C-201ENST00000005226 MAP7D2Q96T17 732 aa16.8■□□□□ 0.28
USH1C-201ENST00000005226 CWF19L2Q2TBE0 894 aaKnown RBP16.79■□□□□ 0.28
USH1C-201ENST00000005226 RBM33Q96EV2 1170 aaKnown RBP16.79■□□□□ 0.28
USH1C-201ENST00000005226 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
USH1C-201ENST00000005226 PROSER3Q2NL68 480 aa16.79■□□□□ 0.28
USH1C-201ENST00000005226 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
USH1C-201ENST00000005226 ZNF710Q8N1W2 664 aa16.79■□□□□ 0.28
USH1C-201ENST00000005226 TPCN1Q9ULQ1 816 aa16.79■□□□□ 0.28
USH1C-201ENST00000005226 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
USH1C-201ENST00000005226 TOPAZ1Q8N9V7 1692 aa16.79■□□□□ 0.28
USH1C-201ENST00000005226 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
USH1C-201ENST00000005226 GLRX3O76003 335 aaKnown RBP16.78■□□□□ 0.28
USH1C-201ENST00000005226 KCNJ4P48050 445 aa16.78■□□□□ 0.28
USH1C-201ENST00000005226 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
USH1C-201ENST00000005226 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
USH1C-201ENST00000005226 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
USH1C-201ENST00000005226 CCDC8Q9H0W5 538 aaPredicted RBP16.78■□□□□ 0.28
USH1C-201ENST00000005226 KCNF1Q9H3M0 494 aa16.78■□□□□ 0.28
USH1C-201ENST00000005226 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
USH1C-201ENST00000005226 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
USH1C-201ENST00000005226 TFIP11Q9UBB9 837 aaKnown RBP16.78■□□□□ 0.28
USH1C-201ENST00000005226 RGPD8O14715 1765 aaPredicted RBP16.78■□□□□ 0.28
USH1C-201ENST00000005226 AACSQ86V21 672 aa16.77■□□□□ 0.28
USH1C-201ENST00000005226 C9orf78Q9NZ63 289 aaPredicted RBP16.77■□□□□ 0.28
USH1C-201ENST00000005226 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.28
USH1C-201ENST00000005226 IFIT2P09913 472 aaKnown RBP16.77■□□□□ 0.28
USH1C-201ENST00000005226 LIG1P18858 919 aa16.77■□□□□ 0.28
USH1C-201ENST00000005226 CDC37L1Q7L3B6 337 aa16.77■□□□□ 0.28
USH1C-201ENST00000005226 TTC6Q86TZ1 520 aa16.77■□□□□ 0.28
USH1C-201ENST00000005226 ZSWIM6Q9HCJ5 1215 aa16.77■□□□□ 0.28
USH1C-201ENST00000005226 ECHDC1Q9NTX5 307 aa16.77■□□□□ 0.28
USH1C-201ENST00000005226 RBM8AQ9Y5S9 174 aaKnown RBP16.77■□□□□ 0.28
USH1C-201ENST00000005226 EPB41L2O43491 1005 aaKnown RBP16.76■□□□□ 0.27
USH1C-201ENST00000005226 LARP1BQ659C4 914 aaKnown RBP16.76■□□□□ 0.27
USH1C-201ENST00000005226 CKAP2LQ8IYA6 745 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 ADCY9O60503 1353 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 STK3Q13188 491 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 VPS53Q5VIR6 699 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 LRRC59Q96AG4 307 aaKnown RBP16.76■□□□□ 0.27
USH1C-201ENST00000005226 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
USH1C-201ENST00000005226 NECTIN1Q15223 517 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 CREB3L3Q68CJ9 461 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 SIL1Q9H173 461 aa16.76■□□□□ 0.27
USH1C-201ENST00000005226 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
USH1C-201ENST00000005226 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
USH1C-201ENST00000005226 NWD1Q149M9 1564 aa16.75■□□□□ 0.27
USH1C-201ENST00000005226 PLEKHG1Q9ULL1 1385 aa16.75■□□□□ 0.27
USH1C-201ENST00000005226 BTBD11A6QL63 1104 aa16.75■□□□□ 0.27
USH1C-201ENST00000005226 LUZP1Q86V48 1076 aa16.75■□□□□ 0.27
USH1C-201ENST00000005226 KLHDC4Q8TBB5 520 aa16.75■□□□□ 0.27
USH1C-201ENST00000005226 EID1Q9Y6B2 187 aa16.75■□□□□ 0.27
USH1C-201ENST00000005226 DIP2BQ9P265 1576 aa16.74■□□□□ 0.27
USH1C-201ENST00000005226 AIMP1Q12904 312 aaKnown RBP16.74■□□□□ 0.27
USH1C-201ENST00000005226 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
USH1C-201ENST00000005226 TTC41PQ6P2S7 1318 aa16.74■□□□□ 0.27
USH1C-201ENST00000005226 TEFQ10587 303 aa16.74■□□□□ 0.27
USH1C-201ENST00000005226 HSP90AB4PQ58FF6 505 aa16.74■□□□□ 0.27
USH1C-201ENST00000005226 EAF2Q96CJ1 260 aaPredicted RBP16.74■□□□□ 0.27
USH1C-201ENST00000005226 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
USH1C-201ENST00000005226 CCDC171Q6TFL3 1326 aa16.74■□□□□ 0.27
USH1C-201ENST00000005226 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
USH1C-201ENST00000005226 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
USH1C-201ENST00000005226 EDC3Q96F86 508 aaKnown RBP16.73■□□□□ 0.27
USH1C-201ENST00000005226 KIAA1524Q8TCG1 905 aa16.73■□□□□ 0.27
USH1C-201ENST00000005226 ZSCAN31Q96LW9 406 aaPredicted RBP16.73■□□□□ 0.27
USH1C-201ENST00000005226 SPTLC3Q9NUV7 552 aa16.73■□□□□ 0.27
USH1C-201ENST00000005226 LRRC37A3O60309 1634 aa16.73■□□□□ 0.27
USH1C-201ENST00000005226 UBR1Q8IWV7 1749 aa16.72■□□□□ 0.27
USH1C-201ENST00000005226 A0A0D9SFI3 127 aa16.72■□□□□ 0.27
USH1C-201ENST00000005226 SASH1O94885 1247 aa16.72■□□□□ 0.27
USH1C-201ENST00000005226 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
USH1C-201ENST00000005226 PTGS1P23219 599 aa16.72■□□□□ 0.27
USH1C-201ENST00000005226 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms