RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Gas2l3Q3UWW6 683 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Hand2Q61039 217 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Slf2Q6P9P0 1278 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 GptQ8QZR5 496 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Trim29Q8R2Q0 587 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Zbtb3Q91X45 518 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 A0A1L1SQF0 893 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Ccnl1Q52KE7 532 aaKnown RBP11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Prpf4bQ61136 1007 aaKnown RBP11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 ThemisQ8BGW0 636 aa11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Smc2Q8CG48 1191 aaKnown RBP11.1□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Cfap65Q3V0B4 1847 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Prune1Q8BIW1 454 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 ImmtQ8CAQ8 757 aaKnown RBP11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Cyp27a1Q9DBG1 533 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Zbtb21E9Q444 1094 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Fam43aQ8BUP8 424 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Krt84Q99M73 603 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Plch2A2AP18 1501 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Pdia4P08003 638 aaKnown RBP11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Prkab2Q6PAM0 271 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Nip7Q9CXK8 180 aaKnown RBP11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Cwc25Q9DBF7 416 aa11.09□□□□□ -0.63
Ldlr-202ENSMUST00000213114 Tnni2P13412 182 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Kdm4aQ8BW72 1064 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Cdc45Q9Z1X9 566 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Cep55Q8BT07 462 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 SetQ9EQU5 289 aaKnown RBP11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Mdm2P23804 489 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Chl1P70232 1209 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Limch1Q3UH68 1057 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Pdzrn3Q69ZS0 1063 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Bms1Q6PGF5 1284 aaKnown RBP11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Wdr33Q8K4P0 1330 aaKnown RBP11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 PzpQ61838 1495 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 A0A0U1RNP2 1173 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Il4rP16382 810 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Pde4dQ01063 747 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Kdm4cQ8VCD7 1054 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Efcab2Q9CQ46 164 aa11.08□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Zmym3Q9JLM4 1370 aa11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ube2hP62257 183 aa11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Hecw1Q8K4P8 1604 aa11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Zcchc11B2RX14 1644 aaKnown RBP11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Cdkn1cP49919 348 aa11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 SympkQ80X82 1284 aa11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Myom2Q14BI5 1463 aa11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Fbln2P37889 1221 aa11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Edc3Q8K2D3 508 aaKnown RBP11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Mlh1Q9JK91 760 aa11.07□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ddx17Q501J6 650 aaKnown RBP11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Cfap69Q8BH53 942 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ccdc158Q8CDI6 1109 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Txnrd1Q9JMH6 613 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Plxnc1Q9QZC2 1574 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ak9G3UYQ4 1894 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Gm32742A0A1B0GT42 1604 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Stat1P42225 749 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ercc3P49135 783 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Frmd3Q8BHD4 595 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Atp10aO54827 1508 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Neurl4Q5NCX5 1563 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ifit2Q64112 472 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 LratQ9JI60 231 aa11.06□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Adcy5P84309 1262 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Krt25Q8VCW2 446 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Dmrtc1Q9D9R7 182 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Syt1P46096 421 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ifit1bl2Q3U687 466 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 SrrtQ99MR6 875 aaKnown RBP11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Kdm5aQ3UXZ9 1690 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Slc35g1Q8BY79 368 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Bloc1s2Q9CWG9 143 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 NapbP28663 298 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Cdkl5Q3UTQ8 938 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Tti2Q8BGV4 512 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Tmx3Q8BXZ1 456 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Hmg20bQ9Z104 317 aa11.05□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Adgrl1Q80TR1 1466 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Stk36Q69ZM6 1316 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Cyp7a1Q64505 503 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Riok1Q922Q2 567 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ipo7Q9EPL8 1038 aaKnown RBP11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Eif5P59325 429 aaKnown RBP11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 SfswapQ3USH5 945 aaKnown RBP11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Kiaa0753Q6A000 959 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Podxl2Q8CAE9 603 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Igbp1bQ9QZ29 343 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Cnksr1A2A9K7 700 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Zkscan7E9PVW1 718 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Larp1Q6ZQ58 1072 aaKnown RBP11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Chd1lQ9CXF7 900 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Ak2Q9WTP6 239 aa11.04□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Gm45015A0A140LII9 184 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Gm18336A0A140LIU8 765 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Zscan20B2KFW1 1030 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 CrklP47941 303 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Eif4a1P60843 406 aaKnown RBP11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 Snx13Q6PHS6 957 aa11.03□□□□□ -0.64
Ldlr-202ENSMUST00000213114 LyarQ08288 388 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms