RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Ankib1Q6ZPS6 1085 aa11.58□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Zbtb3Q91X45 518 aa11.58□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Smarce1O54941 411 aaKnown RBP11.58□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Slc26a8Q8R0C3 999 aa11.58□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Tpx2A2APB8 745 aaKnown RBP11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Sf3b2Q3UJB0 878 aaKnown RBP11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Tmem87bQ8BKU8 555 aa11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Lrrc59Q922Q8 307 aaKnown RBP11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Pdia6Q922R8 440 aaKnown RBP11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Ddx11Q6AXC6 880 aa11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Phactr2B1AVP0 632 aa11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Qtrt2B8ZXI1 415 aa11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Myd88P22366 296 aa11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Cwc25Q9DBF7 416 aa11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Catsper2A2ARP9 588 aa11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Jmjd4Q8BFT6 427 aa11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Bag3Q9JLV1 577 aaKnown RBP11.57□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Atp6v1dP57746 247 aa11.56□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Plcd3Q8K2J0 785 aa11.56□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 NmiO35309 314 aa11.56□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Jakmip1Q8BVL9 626 aa11.56□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Ttc19Q8CC21 365 aa11.56□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Sf3a1Q8K4Z5 791 aaKnown RBP11.56□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Ginm1Q91WR6 327 aa11.56□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Erbb4Q61527 1308 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Gm12185Q5NCB2 835 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 BcanQ61361 883 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 AnlnQ8K298 1121 aaKnown RBP11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 PtmsQ9D0J8 101 aaKnown RBP11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Tns2Q8CGB6 1400 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Hspa2P17156 633 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Filip1lQ6P6L0 1131 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Pde4dQ01063 747 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Zbtb40Q6PCS8 1258 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Rhot2Q8JZN7 620 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Slc5a4bQ91ZP4 660 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Kif2cQ922S8 721 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Ltbp4Q8K4G1 1666 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Syde2E9PUP1 1314 aa11.55□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Sik1Q60670 779 aa11.54□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Prune1Q8BIW1 454 aa11.54□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Spryd3E9Q9B3 442 aa11.54□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Trim52Q8CDV4 233 aa11.54□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Ints5Q8CHT3 1018 aa11.54□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 KinQ8K339 391 aa11.54□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Top1mtQ8R4U6 593 aa11.54□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Fam43aQ8BUP8 424 aa11.54□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Kiaa1211Q5PR69 1207 aa11.53□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Jarid2Q62315 1234 aa11.53□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Ybx3Q9JKB3 361 aaKnown RBP11.53□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Mrps27Q8BK72 415 aaKnown RBP11.53□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Nlrp3Q8R4B8 1033 aa11.53□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Nip7Q9CXK8 180 aaKnown RBP11.53□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Ppm1mQ8BU27 406 aa11.53□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Cap2Q9CYT6 476 aa11.52□□□□□ -0.56
Sh3rf1-202ENSMUST00000209611 Abcc4E9Q236 1325 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Adora1Q60612 326 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Kdm4cQ8VCD7 1054 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Fam213aQ9CYH2 218 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Rrs1Q9CYH6 365 aaKnown RBP11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Chmp4cQ9D7F7 232 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Trim44Q9QXA7 346 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 MypnQ5DTJ9 1315 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Bcl9lQ67FY2 1494 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Edc3Q8K2D3 508 aaKnown RBP11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Rapgef4Q9EQZ6 1011 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Il1rapl2Q9ERS6 686 aa11.52□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Clcn1Q64347 994 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Tshz3Q8CGV9 1081 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 PhaxQ9JJT9 385 aaKnown RBP11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Ets1P27577 440 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Ddb1Q3U1J4 1140 aaKnown RBP11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Nol8Q3UHX0 1147 aaKnown RBP11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Ripor2Q80U16 1078 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Zkscan1Q8BGS3 561 aaKnown RBP11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Pdcl3Q8BVF2 240 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Hdac6Q9Z2V5 1149 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Ppfia1B2RXQ2 1266 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Igfbp6P47880 238 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Ints3Q7TPD0 1041 aaKnown RBP11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Pm20d1Q8C165 503 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Vsig10D3YX43 558 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Sh3bp5Q9Z131 463 aa11.51□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Zkscan16A2ALW2 728 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Anapc15P60007 132 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 St18Q80TY4 1045 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Mylk2Q8VCR8 613 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 InsrrQ9WTL4 1300 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Kcnh4A2A5F7 1018 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Gsdma2Q32M21 443 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Rassf8Q8CJ96 419 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Rbm27Q5SFM8 1060 aaKnown RBP11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Unc5clQ6R653 518 aa11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 LlphQ9D945 130 aaKnown RBP11.5□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Zbtb45Q52KG4 520 aa11.49□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Rnf20Q5DTM8 973 aa11.49□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Ppp4r3aQ6P2K6 820 aa11.49□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Dcaf5Q80T85 946 aa11.49□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Myo5bP21271 1818 aa11.49□□□□□ -0.57
Sh3rf1-202ENSMUST00000209611 Fbxo2Q80UW2 297 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms