RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Tlcd1Q99JT6 247 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Stx6Q9JKK1 255 aa10.32□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ubn2Q80WC1 1314 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Arhgef28P97433 1693 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 GscQ02591 256 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Nol8Q3UHX0 1147 aaKnown RBP10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 EappQ5BU09 281 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Zpr1Q62384 459 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 MarsQ68FL6 902 aaKnown RBP10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Nup88Q8CEC0 753 aaKnown RBP10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Tshz3Q8CGV9 1081 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 RestQ8VIG1 1082 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 CenpjQ569L8 1344 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Anp32eP97822 260 aaKnown RBP10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Cavin2Q63918 418 aaKnown RBP10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Pdzrn3Q69ZS0 1063 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Zfp804bA0A0G2JGH6 1343 aa10.31□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Tyro3P55144 880 aa10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Bcar3Q9QZK2 820 aa10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Nfe2l3Q9WTM4 660 aa10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Cdk12Q14AX6 1484 aaKnown RBP10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Zkscan2G3X952 960 aa10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Cdk19Q8BWD8 501 aa10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Rbm33Q9CXK9 1231 aaKnown RBP10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Gtf3c6Q9D8P7 227 aa10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Rai14Q9EP71 979 aaKnown RBP10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Pmfbp1Q9WVQ0 1022 aa10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Wdr33Q8K4P0 1330 aaKnown RBP10.3□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Gnai1B2RSH2 354 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Hmx1O70218 332 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Cd22P35329 862 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Paxbp1P58501 919 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ube2q2Q8K2Z8 378 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Tomm22Q9CPQ3 142 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Odf2lQ9D478 642 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Gnai3Q9DC51 354 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Hsp90b1P08113 802 aaKnown RBP10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Fchsd2Q3USJ8 740 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ints3Q7TPD0 1041 aaKnown RBP10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Iqca1Q9CUL5 857 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 EcsitQ9QZH6 435 aa10.29□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Frat1P70339 274 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Plin1Q8CGN5 517 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Slx4ipQ9D7Y9 413 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Igbp1bQ9QZ29 343 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Abca14E9Q8F8 1683 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Dip2bQ3UH60 1574 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Jakmip1Q8BVL9 626 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 PalmQ9Z0P4 383 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Alpk3Q924C5 1678 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Fmnl2A2APV2 1086 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Chrm1P12657 460 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Ube2oQ6ZPJ3 1288 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Spag5Q7TME2 1165 aa10.28□□□□□ -0.76
Pdgfra-208ENSMUST00000202681 Arid4aF8VPQ2 1261 aaKnown RBP10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 H2afxP27661 143 aaKnown RBP10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Prkar2bP31324 416 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 U2surpQ6NV83 1029 aaKnown RBP10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Polr3gQ6NXY9 223 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Rassf4Q8CB96 322 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Casz1Q9CWL2 1761 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Surf1P09925 306 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Hmox1P14901 289 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Babam1Q3UI43 333 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Pof1bQ8K4L4 587 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Usp16Q99LG0 825 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Smc3Q9CW03 1217 aaKnown RBP10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Slc52a2Q9D8F3 450 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Golga5Q9QYE6 729 aa10.27□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 UncxO08934 530 aa10.26□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Lrrc8aQ80WG5 810 aa10.26□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Fam177a1Q8BR63 207 aa10.26□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Slc12a5Q91V14 1138 aa10.26□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Zkscan4Q5SZT6 480 aa10.26□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Ptpdc1Q6NZK8 747 aa10.26□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Fam117aQ7TNF9 451 aa10.26□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Znf771Q8BJ90 317 aa10.26□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Ift172Q6VH22 1749 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Tmx1Q8VBT0 278 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Bicd2Q921C5 820 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 TnmdQ9EP64 317 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Mad1l1Q9WTX8 717 aaKnown RBP10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Chd2E9PZM4 1827 aaKnown RBP10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Tmem94Q7TSH8 1360 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Ms4a2P20490 235 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Aifm3Q3TY86 605 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Arid5bQ8BM75 1188 aaKnown RBP10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Dnaaf2Q8BPI1 814 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Elf2Q9JHC9 593 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Sos1Q62245 1319 aa10.25□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 AW822073A0A0N4SUK1 652 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Kif3cO35066 796 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Znf532Q6NXK2 1036 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Pnpla2Q8BJ56 486 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Bmp2kQ91Z96 1138 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Evi5lH3BKQ3 813 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Rfc1P35601 1131 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Rufy3Q9D394 469 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Klra1P20937 262 aa10.24□□□□□ -0.77
Pdgfra-208ENSMUST00000202681 Dnaaf4Q8R368 420 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms