RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Krt85Q9Z2T6 507 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Fam213aQ9CYH2 218 aa16.22■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Phkg2Q9DB30 406 aa16.22■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Terf2O35144 541 aa16.22■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Adgrb3Q80ZF8 1522 aa16.22■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Zc3h12cQ5DTV4 884 aa16.22■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Wasf1Q8R5H6 559 aa16.22■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Adgrl1Q80TR1 1466 aa16.22■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Cep152A2AUM9 1736 aaKnown RBP16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Tmco3Q8BH01 678 aa16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Pmfbp1Q9WVQ0 1022 aa16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Cnnm3Q32NY4 713 aa16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Krt25Q8VCW2 446 aa16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Ftsj3Q9DBE9 838 aaKnown RBP16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Kdm5aQ3UXZ9 1690 aa16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Gtf2f1Q3THK3 508 aaKnown RBP16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Knl1Q66JQ7 1612 aa16.21■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Drc7Q6V3W6 876 aa16.21■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Ttc5Q99LG4 440 aa16.21■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Il1rapl2Q9ERS6 686 aa16.21■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Txnrd1Q9JMH6 613 aa16.21■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Ppfia1B2RXQ2 1266 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Hvcn1Q3U2S8 269 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Gas2l2Q5SSG4 860 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 TnmdQ9EP64 317 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Znf287Q9EQB9 759 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Zscan20B2KFW1 1030 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 NapbP28663 298 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 VeztQ3ZK22 780 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Nat10Q8K224 1024 aaKnown RBP16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Izumo3A6PWV3 263 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Ripk4Q9ERK0 786 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Hmg20bQ9Z104 317 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Fndc1E9Q043 1732 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Spg7Q3ULF4 781 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 CenppQ9CZ92 286 aa16.2■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Znf692Q3U381 531 aa16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Ankrd13dQ6PD24 605 aa16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Tmem67Q8BR76 992 aa16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Pm20d1Q8C165 503 aa16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Rcan3Q9JKK0 239 aa16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Rufy1Q8BIJ7 712 aa16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Nup88Q8CEC0 753 aaKnown RBP16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Ppp4r3bQ922R5 820 aa16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Sel1lQ9Z2G6 790 aa16.19■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Wdr78E9PYY5 807 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 SympkQ80X82 1284 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Fam160b2Q80YR2 744 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Gm45140A0A0N4SUM8 220 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Ltv1Q6NSQ7 470 aaKnown RBP16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Rnf41Q8BH75 317 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Cep55Q8BT07 462 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Fez2Q6TYB5 348 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Golim4Q8BXA1 655 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Atg3Q9CPX6 314 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Stk36Q69ZM6 1316 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Ier5O89113 308 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Atf7Q8R0S1 413 aa16.18■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Cnksr1A2A9K7 700 aa16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Pof1bQ8K4L4 587 aa16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Cdc42bpgQ80UW5 1551 aa16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Med14A2ABV5 1459 aaKnown RBP16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Syce3B5KM66 88 aa16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Nkx1-2P42580 305 aa16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Def6Q8C2K1 630 aa16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Bicc1Q99MQ1 977 aaKnown RBP16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Dnajc2P54103 621 aaKnown RBP16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 ParvgQ9ERD8 331 aa16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Nckap5lQ6GQX2 1323 aa16.17■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Odf2A3KGV1 830 aaKnown RBP16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Dip2cE9PWR4 1557 aa16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Babam1Q3UI43 333 aa16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Mybbp1aQ7TPV4 1344 aaKnown RBP16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Wdr33Q8K4P0 1330 aaKnown RBP16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Cyp26c1B2RXA7 518 aa16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 LlphQ9D945 130 aaKnown RBP16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Kiaa1107Q80TK0 1369 aa16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Ak9G3UYQ4 1894 aa16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Chaf1aQ9QWF0 911 aa16.16■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Uhrf1bp1lA2RSJ4 1457 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Klf15Q9EPW2 415 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Usp19Q3UJD6 1360 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Jakmip2D3YXK0 820 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Spag5Q7TME2 1165 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 FancaQ9JL70 1439 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 AglF8VPN4 1532 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Rbbp8nlA2ABX0 614 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Cfap58B2RW38 873 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Pdzd9Q9D9M4 266 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 Abca6Q8K441 1624 aa16.15■□□□□ 0.18
Pcdha1-202ENSMUST00000193839 March6Q6ZQ89 909 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 4931400O07RikQ9D4M5 137 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Atp2b3Q0VF55 1220 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 SfswapQ3USH5 945 aaKnown RBP16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Bag4Q8CI61 457 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Tnni2P13412 182 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Prkab2Q6PAM0 271 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Tex2Q6ZPJ0 1128 aaKnown RBP16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Rdm1Q9CQK3 281 aa16.14■□□□□ 0.17
Pcdha1-202ENSMUST00000193839 Qtrt2B8ZXI1 415 aa16.14■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms