RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Slit1Q80TR4 1531 aa11.95□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Psrc1Q9D0P7 329 aa11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Il1rapl2Q9ERS6 686 aa11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 EspnlQ3UYR4 1005 aa11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Dhx38Q80X98 1228 aa11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 4930504O13RikQ8C5Z9 145 aa11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Dmrtc1Q9D9R7 182 aa11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Siglec1Q62230 1695 aa11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Myd88P22366 296 aa11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Sf3b2Q3UJB0 878 aaKnown RBP11.94□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Tns2Q8CGB6 1400 aa11.93□□□□□ -0.5
Rnf41-202ENSMUST00000171342 DccP70211 1447 aa11.93□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Rsph3aQ3UFY4 516 aa11.93□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Nip7Q9CXK8 180 aaKnown RBP11.93□□□□□ -0.5
Rnf41-202ENSMUST00000171342 MypnQ5DTJ9 1315 aa11.93□□□□□ -0.5
Rnf41-202ENSMUST00000171342 MecomP14404 1042 aa11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Gnat3Q3V3I2 354 aa11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Eno4Q8C042 619 aa11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Casq1O09165 405 aa11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Nol8Q3UHX0 1147 aaKnown RBP11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Nol10Q5RJG1 687 aaKnown RBP11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Unc5clQ6R653 518 aa11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Rrs1Q9CYH6 365 aaKnown RBP11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Bag3Q9JLV1 577 aaKnown RBP11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Zbtb40Q6PCS8 1258 aa11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Smc4Q8CG47 1286 aa11.92□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Ripor2Q80U16 1078 aa11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Lrrc59Q922Q8 307 aaKnown RBP11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Cwc25Q9DBF7 416 aa11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Ybx3Q9JKB3 361 aaKnown RBP11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Zkscan16A2ALW2 728 aa11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Gm12185Q5NCB2 835 aa11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Sik1Q60670 779 aa11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Morc2aQ69ZX6 1030 aa11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Wnk3Q80XP9 1757 aa11.91□□□□□ -0.5
Rnf41-202ENSMUST00000171342 NexnQ7TPW1 607 aa11.9□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Hdac6Q9Z2V5 1149 aa11.9□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Abcc4E9Q236 1325 aa11.9□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Ubap1lG3UW59 384 aa11.9□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Strn4P58404 760 aa11.9□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Sf3a1Q8K4Z5 791 aaKnown RBP11.9□□□□□ -0.5
Rnf41-202ENSMUST00000171342 GptQ8QZR5 496 aa11.9□□□□□ -0.5
Rnf41-202ENSMUST00000171342 Dcaf5Q80T85 946 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Jmjd4Q8BFT6 427 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Trim52Q8CDV4 233 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Top1mtQ8R4U6 593 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Mlh1Q9JK91 760 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Pmfbp1Q9WVQ0 1022 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Pde3bQ61409 1100 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 EngaseQ8BX80 734 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Slc5a4bQ91ZP4 660 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Bcl2l12Q9D3J3 255 aa11.89□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Gnl3lQ6PGG6 577 aaKnown RBP11.88□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Znf526Q8BI66 675 aa11.88□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Tmem87bQ8BKU8 555 aa11.88□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Taf5lQ91WQ5 589 aa11.88□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Myo5bP21271 1818 aa11.88□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ddb1Q3U1J4 1140 aaKnown RBP11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Fam228bQ497Q6 232 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ddx11Q6AXC6 880 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ssh1Q76I79 1042 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Noc3lQ8VI84 807 aaKnown RBP11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ccdc129Q14B48 1034 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Nlrp9bQ66X22 1003 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Filip1lQ6P6L0 1131 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Dis3l2Q8CI75 870 aaKnown RBP11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Cyp27a1Q9DBG1 533 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 InsrrQ9WTL4 1300 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Timm10P62073 90 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ltb4r2Q9JJL9 360 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Gli3Q61602 1583 aa11.87□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Dlg5E9Q9R9 1921 aa11.86□□□□□ -0.51
Rnf41-202ENSMUST00000171342 EvcP57680 1005 aa11.86□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Miga2Q8BK03 593 aa11.86□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Kdm4cQ8VCD7 1054 aa11.86□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Fam213aQ9CYH2 218 aa11.86□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Bicdl1A0JNT9 577 aa11.86□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Nlrp3Q8R4B8 1033 aa11.86□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ppfia1B2RXQ2 1266 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Vps54Q5SPW0 977 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ltv1Q6NSQ7 470 aaKnown RBP11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Bsdc1Q80Y55 427 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ankrd23Q812A3 306 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 F2rP30558 430 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ddx46Q569Z5 1032 aaKnown RBP11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Mrps27Q8BK72 415 aaKnown RBP11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Rassf8Q8CJ96 419 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Slx4ipQ9D7Y9 413 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Kcnh4A2A5F7 1018 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Hoxa7P02830 229 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 AnlnQ8K298 1121 aaKnown RBP11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Zbtb1Q91VL9 713 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Ginm1Q91WR6 327 aa11.85□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Sult6b1P0CC03 303 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Mdm2P23804 489 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 DbnlQ62418 436 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Nol12Q8BG17 217 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Rapgef4Q9EQZ6 1011 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Prl3d3A0A0M6L0J6 224 aa11.84□□□□□ -0.51
Rnf41-202ENSMUST00000171342 Klc3Q91W40 508 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms