RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Stard3nlQ9DCI3 235 aa17.55■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Zswim8Q3UHH1 1832 aaKnown RBP17.55■□□□□ 0.4
Ercc1-203ENSMUST00000160369 MypnQ5DTJ9 1315 aa17.54■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Exoc6bA6H5Z3 810 aa17.54■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Cyp2c23E9Q5K4 494 aa17.54■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Hspa2P17156 633 aa17.54■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Myd88P22366 296 aa17.54■□□□□ 0.4
Ercc1-203ENSMUST00000160369 HellsQ60848 821 aa17.54■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Ppm1mQ8BU27 406 aa17.54■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Mrps5Q99N87 432 aaKnown RBP17.54■□□□□ 0.4
Ercc1-203ENSMUST00000160369 AK157302I3ITR1 129 aa17.53■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Isca1Q9D924 129 aa17.53■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Usp21Q9QZL6 566 aa17.53■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Lrp5Q91VN0 1614 aa17.53■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Q3UPC7 1272 aa17.52■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Mphosph10Q810V0 681 aaKnown RBP17.52■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Cwc25Q9DBF7 416 aa17.52■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Foxo3Q9WVH4 672 aa17.52■□□□□ 0.4
Ercc1-203ENSMUST00000160369 Duox1A2AQ92 1551 aa17.52■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Togaram1Q6A070 1776 aaKnown RBP17.51■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Aifm3Q3TY86 605 aa17.51■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Susd4Q8BH32 490 aa17.51■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Tango6Q8C3S2 1079 aa17.51■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Rwdd1Q9CQK7 243 aa17.51■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Ehd4Q9EQP2 541 aa17.51■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Ltb4r2Q9JJL9 360 aa17.51■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Aldh1l1Q8R0Y6 902 aa17.5■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Dbndd1Q9CZ00 160 aa17.5■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Cyp2c67Q569X9 491 aa17.49■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Soga3Q6NZL0 945 aa17.49■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Fam213aQ9CYH2 218 aa17.49■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Kcnn1Q9EQR3 537 aa17.49■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Cfdp1O88271 295 aaKnown RBP17.48■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Rad23bP54728 416 aa17.48■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Eif5bQ05D44 1216 aaKnown RBP17.48■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Bend3Q6PAL0 825 aa17.48■□□□□ 0.39
Ercc1-203ENSMUST00000160369 IarsQ8BU30 1262 aa17.48■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Ttc14Q9CSP9 761 aa17.48■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Eif3aP23116 1344 aaKnown RBP17.47■□□□□ 0.39
Ercc1-203ENSMUST00000160369 StrcQ8VIM6 1809 aa17.47■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Slurp2P0DP59 97 aa17.47■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Eva1cP58659 440 aa17.47■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Arap2Q8BZ05 1703 aa17.47■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Cops6O88545 324 aa17.46■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Lmnb1P14733 588 aaKnown RBP17.46■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Zap70P43404 618 aa17.46■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Cct4P80315 539 aaKnown RBP17.46■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Ripor2Q80U16 1078 aa17.46■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Strip1Q8C079 837 aa17.46■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Lmbr1lQ9D1E5 489 aa17.46■□□□□ 0.39
Ercc1-203ENSMUST00000160369 Q8C6G1 249 aa17.45■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Smc4Q8CG47 1286 aa17.45■□□□□ 0.38
Ercc1-203ENSMUST00000160369 GptQ8QZR5 496 aa17.45■□□□□ 0.38
Ercc1-203ENSMUST00000160369 SnrkQ8VDU5 748 aa17.45■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Rbm5Q91YE7 815 aaKnown RBP17.45■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Taf1dQ9D4V4 322 aa17.45■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Foxo4Q9WVH3 505 aa17.45■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Ank1Q02357 1862 aa17.45■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Cyp19a1P28649 503 aa17.44■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Ttc19Q8CC21 365 aa17.44■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Znf330Q922H9 316 aa17.44■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Apbb1Q9QXJ1 710 aa17.44■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Sh3tc1G3X9F6 1346 aa17.44■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Mrc1Q61830 1456 aa17.44■□□□□ 0.38
Ercc1-203ENSMUST00000160369 NmiO35309 314 aa17.43■□□□□ 0.38
Ercc1-203ENSMUST00000160369 CanxP35564 591 aaKnown RBP17.43■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Grm8P47743 908 aa17.43■□□□□ 0.38
Ercc1-203ENSMUST00000160369 L3mbtl2P59178 703 aa17.43■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Cyp7a1Q64505 503 aa17.43■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Camkk2Q8C078 588 aa17.43■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Casz1Q9CWL2 1761 aa17.43■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Kif13bA0A286YCV9 1847 aa17.42■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Trim34bJ3QNR8 485 aa17.42■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Map3k13Q1HKZ5 959 aa17.42■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Znf710Q3U288 666 aa17.42■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Clca2Q8BG22 942 aa17.42■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Ciapin1Q8WTY4 309 aa17.42■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Rnaseh2aQ9CWY8 301 aa17.42■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Ankrd31A0A140LI88 1765 aa17.42■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Trim58Q5NCC9 485 aa17.41■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Mum1Q6DID5 682 aa17.41■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Atp2b4Q6Q477 1205 aa17.41■□□□□ 0.38
Ercc1-203ENSMUST00000160369 NexnQ7TPW1 607 aa17.41■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Kcna3P16390 528 aa17.4■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Plcb3P51432 1234 aaKnown RBP17.4■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Zbtb38Q3LR78 1197 aa17.4■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Gnat3Q3V3I2 354 aa17.4■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Nol10Q5RJG1 687 aaKnown RBP17.4■□□□□ 0.38
Ercc1-203ENSMUST00000160369 Aknad1E9Q8N6 675 aa17.39■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Igflr1Q3U4N7 345 aa17.39■□□□□ 0.37
Ercc1-203ENSMUST00000160369 TrhQ62361 256 aa17.39■□□□□ 0.37
Ercc1-203ENSMUST00000160369 PrimpolQ6P1E7 537 aa17.39■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Nutm1Q8BHP2 1126 aa17.39■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Myh1Q5SX40 1942 aa17.39■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Cyp2c69E9PXC3 491 aa17.38■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Atp6v0a2P15920 856 aa17.38■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Cyp2c40P56657 491 aa17.38■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Gja5Q01231 358 aa17.38■□□□□ 0.37
Ercc1-203ENSMUST00000160369 BcanQ61361 883 aa17.38■□□□□ 0.37
Ercc1-203ENSMUST00000160369 Pdzph1Q8BGR1 1238 aa17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms