RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Insm1Q63ZV0 521 aa23.58■■□□□ 1.37
Sqstm1-205ENSMUST00000143379 Ppp2r1aQ76MZ3 589 aa23.58■■□□□ 1.37
Sqstm1-205ENSMUST00000143379 Map3k9Q3U1V8 1077 aa23.57■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Foxd1Q61345 456 aa23.57■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Llgl2Q3TJ91 1027 aa23.56■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Dctn1O08788 1281 aa23.55■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Rbm5Q91YE7 815 aaKnown RBP23.55■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Ttc5Q99LG4 440 aa23.55■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Flt4P35917 1363 aa23.54■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Ssc5dQ8BV57 1371 aa23.54■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Atp2b4Q6Q477 1205 aa23.54■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Flad1Q8R123 492 aa23.54■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Mical3Q8CJ19 1993 aa23.54■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Pde4bB1AWC9 736 aa23.53■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Hspa8P63017 646 aaKnown RBP23.53■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Phf23Q8BSN5 401 aa23.53■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Pdia6Q922R8 440 aaKnown RBP23.53■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Btaf1E9QAE3 1848 aa23.52■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Iqsec3Q3TES0 1195 aa23.52■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Scaf8Q6DID3 1268 aa23.52■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Atxn2lQ7TQH0 1049 aaKnown RBP23.52■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Myo5bP21271 1818 aa23.52■■□□□ 1.36
Sqstm1-205ENSMUST00000143379 Bcl2l13P59017 434 aa23.51■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Tsen2Q6P7W5 460 aa23.51■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 AfdnQ9QZQ1 1820 aaKnown RBP23.51■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Slc51aQ8R000 340 aa23.5■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Prr29B1ARI9 187 aa23.49■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Chrna5Q2MKA5 467 aa23.49■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Strip1Q8C079 837 aa23.49■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 TefQ9JLC6 301 aa23.49■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Atp6v0a2P15920 856 aa23.48■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Prim1P20664 417 aa23.48■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Mapk8ip1Q9WVI9 707 aa23.48■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Npy5rO70342 466 aa23.47■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Nlrp6Q91WS2 869 aa23.47■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Scn11aQ9R053 1765 aa23.47■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 PnnO35691 725 aaKnown RBP23.46■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Pou3f3P31361 497 aa23.46■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Zc3h12cQ5DTV4 884 aa23.46■■□□□ 1.35
Sqstm1-205ENSMUST00000143379 Rtf1A2AQ19 715 aaKnown RBP23.45■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Angel2Q8K1C0 544 aa23.45■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 NynrinQ5DTZ0 1840 aa23.44■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Sipa1l3G3X9J0 1776 aa23.44■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Glt1d1A4FUP9 346 aa23.43■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Cct4P80315 539 aaKnown RBP23.43■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Pcsk7Q61139 770 aa23.43■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Gimap8Q75N62 688 aa23.43■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 U2af1Q9D883 239 aaKnown RBP23.43■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 GsdmaQ9EST1 446 aa23.42■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Cers3Q1A3B0 383 aa23.41■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Ggnbp2Q5SV77 696 aa23.41■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Eif6O55135 245 aa23.4■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Igfbp6P47880 238 aa23.4■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Rtkn2Q14B46 604 aa23.4■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Q4VA45 678 aa23.4■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Nlrp3Q8R4B8 1033 aa23.4■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Igf2bp3Q9CPN8 579 aaKnown RBP23.4■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 Ripk3Q9QZL0 486 aa23.4■■□□□ 1.34
Sqstm1-205ENSMUST00000143379 CastP51125 788 aa23.39■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Map9Q3TRR0 646 aa23.39■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Susd4Q8BH32 490 aa23.39■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Ly6iQ9WU67 134 aa23.39■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Mybbp1aQ7TPV4 1344 aaKnown RBP23.38■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Aknad1E9Q8N6 675 aa23.38■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Tom1l2Q5SRX1 507 aa23.38■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Foxn1Q61575 648 aa23.38■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Mkrn1Q9QXP6 481 aa23.38■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Col1a2Q01149 1372 aa23.38■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Tnnt1O88346 262 aa23.36■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Iqcf3Q9D498 203 aa23.36■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Cyp2d12Q8BVD2 504 aa23.35■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Tm4sf4Q91XD3 202 aa23.35■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Trim34aQ99PP6 485 aa23.35■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 NinQ61043 2035 aa23.35■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Eif4a1P60843 406 aaKnown RBP23.34■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Hspa2P17156 633 aa23.33■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Psd3Q2PFD7 1037 aa23.33■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Skor1Q8BX46 964 aa23.33■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 GckrQ91X44 587 aa23.33■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Dpp7Q9ET22 506 aa23.33■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Foxo3Q9WVH4 672 aa23.33■■□□□ 1.33
Sqstm1-205ENSMUST00000143379 Fkbp4P30416 458 aa23.32■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Rbm17Q8JZX4 405 aaKnown RBP23.32■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 WaslQ91YD9 501 aa23.32■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Ltn1Q6A009 1767 aa23.32■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Glg1Q61543 1175 aaKnown RBP23.31■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 RubcnQ80U62 956 aa23.31■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Eva1cP58659 440 aa23.3■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Ankrd13cQ3UX43 541 aa23.3■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Uhrf1bp1B2KF50 1429 aa23.3■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Ankrd31A0A140LI88 1765 aa23.29■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Ttll7A4Q9F0 912 aa23.29■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Podnl1Q6P3Y9 559 aa23.29■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Ccdc93Q7TQK5 629 aa23.29■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Myoz2Q9JJW5 264 aa23.29■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Taf7Q9R1C0 341 aa23.29■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Cyp2ab1S4R196 498 aa23.29■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Gm42688A0A0R3P9D1 673 aa23.28■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Prpmp5E9PXN1 296 aa23.28■■□□□ 1.32
Sqstm1-205ENSMUST00000143379 Cxcl9P18340 126 aa23.28■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms