RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Tagap1P0CAX8 505 aa20.97■□□□□ 0.95
Trim71-201ENSMUST00000111816 Ppp1r12cQ3UMT1 782 aa20.97■□□□□ 0.95
Trim71-201ENSMUST00000111816 Fgfr1opQ66JX5 399 aa20.97■□□□□ 0.95
Trim71-201ENSMUST00000111816 Srgap3Q812A2 1099 aa20.97■□□□□ 0.95
Trim71-201ENSMUST00000111816 Kif5aP33175 1027 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Gng11P61953 73 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Sil1Q9EPK6 465 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Sec62Q8BU14 398 aaKnown RBP20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Yeats4Q9CR11 227 aaKnown RBP20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Kif18aQ91WD7 886 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Cavin4A2AMM0 362 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 IkbkgO88522 412 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Dnajc8Q6NZB0 253 aaKnown RBP20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Fam204aQ8C6C7 236 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Sirt1Q923E4 737 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Irgm2A0A140LIF8 407 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Ccdc91Q9D8L5 442 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Trim17Q7TPM3 477 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Nutm1Q8BHP2 1126 aa20.96■□□□□ 0.95
Trim71-201ENSMUST00000111816 Usp11Q99K46 921 aa20.95■□□□□ 0.94
Trim71-201ENSMUST00000111816 Riok3Q9DBU3 519 aaKnown RBP20.95■□□□□ 0.94
Trim71-201ENSMUST00000111816 Setdb1O88974 1307 aa20.95■□□□□ 0.94
Trim71-201ENSMUST00000111816 Smarcc2Q6PDG5 1213 aa20.95■□□□□ 0.94
Trim71-201ENSMUST00000111816 Mroh7A2AVR2 1279 aa20.95■□□□□ 0.94
Trim71-201ENSMUST00000111816 Apol7bB1AQP7 369 aa20.95■□□□□ 0.94
Trim71-201ENSMUST00000111816 Luc7l2Q7TNC4 392 aaKnown RBP20.95■□□□□ 0.94
Trim71-201ENSMUST00000111816 Ccdc40Q8BI79 1192 aa20.95■□□□□ 0.94
Trim71-201ENSMUST00000111816 Zfp397Q7TNK4 527 aa20.94■□□□□ 0.94
Trim71-201ENSMUST00000111816 Tmc2Q8R4P4 888 aa20.94■□□□□ 0.94
Trim71-201ENSMUST00000111816 Zkscan7E9PVW1 718 aa20.94■□□□□ 0.94
Trim71-201ENSMUST00000111816 GlmnQ8BZM1 596 aa20.94■□□□□ 0.94
Trim71-201ENSMUST00000111816 Ccdc178Q8CDV0 866 aa20.94■□□□□ 0.94
Trim71-201ENSMUST00000111816 Trpc3Q9QZC1 836 aa20.94■□□□□ 0.94
Trim71-201ENSMUST00000111816 Eef1dP57776 281 aaKnown RBP20.94■□□□□ 0.94
Trim71-201ENSMUST00000111816 Rad23bP54728 416 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cep55Q8BT07 462 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cnga2Q62398 664 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Ppfibp1Q8C8U0 969 aaKnown RBP20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Rabgap1A2AWA9 1064 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Usp37Q8C0R0 979 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Frat2Q8K025 231 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Igbp1bQ9QZ29 343 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Speer4bQ9D9F7 267 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Nphp3Q7TNH6 1325 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 PrphP15331 475 aa20.93■□□□□ 0.94
Trim71-201ENSMUST00000111816 Znf365Q8BG89 408 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Clasp2Q8BRT1 1286 aaKnown RBP20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cacna1dQ99246 2179 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cul5Q9D5V5 780 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Ano2Q8CFW1 1002 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Psmd6Q99JI4 389 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Api5O35841 504 aaKnown RBP20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Prpf31Q8CCF0 499 aaKnown RBP20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 4931400O07RikQ9D4M5 137 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Ces1hD3Z298 562 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Speer4aF8VPX6 267 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Slc8a1P70414 970 aa20.92■□□□□ 0.94
Trim71-201ENSMUST00000111816 Apol7eQ3UZ24 369 aa20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 Bank1Q80VH0 783 aa20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 Rfwd2Q9R1A8 733 aaKnown RBP20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 Rab3gap2Q8BMG7 1366 aa20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cfap157Q0VFX2 523 aa20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cracr2aQ3UP38 310 aa20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 Serpina10Q8R121 448 aa20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 Mink1Q9JM52 1308 aa20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 Ccdc57Q6PHN1 1016 aa20.91■□□□□ 0.94
Trim71-201ENSMUST00000111816 AidaQ8C4Q6 305 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Chmp2aQ9DB34 222 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Tbc1d31Q6NXY1 996 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 ErbinQ80TH2 1402 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cog7Q3UM29 770 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cavin2Q63918 418 aaKnown RBP20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Iws1Q8C1D8 766 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Dync1i2O88487 612 aaKnown RBP20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Top1mtQ8R4U6 593 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cdca8Q8BHX3 289 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Nup133Q8R0G9 1155 aa20.9■□□□□ 0.94
Trim71-201ENSMUST00000111816 Fam114a2Q8VE88 497 aa20.89■□□□□ 0.94
Trim71-201ENSMUST00000111816 JmyQ9QXM1 983 aa20.89■□□□□ 0.94
Trim71-201ENSMUST00000111816 Eps15P42567 897 aa20.89■□□□□ 0.94
Trim71-201ENSMUST00000111816 Cct6bQ61390 531 aa20.89■□□□□ 0.94
Trim71-201ENSMUST00000111816 Nedd9O35177 833 aa20.89■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ccdc121E9Q6D3 323 aa20.89■□□□□ 0.93
Trim71-201ENSMUST00000111816 Smc6Q924W5 1097 aa20.89■□□□□ 0.93
Trim71-201ENSMUST00000111816 Cfap69Q8BH53 942 aa20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Igf2bp2Q5SF07 592 aaKnown RBP20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Actr5Q80US4 605 aaKnown RBP20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Efcab5A0JP43 1406 aa20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Matr3Q8K310 846 aaKnown RBP20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 PalmdQ9JHU2 551 aa20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Satb2Q8VI24 733 aa20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ube2hP62257 183 aa20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Krt15Q61414 452 aa20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Krt23Q99PS0 422 aa20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Zkscan5Q9Z1D8 819 aa20.88■□□□□ 0.93
Trim71-201ENSMUST00000111816 Mx2Q9WVP9 655 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Krt77Q6IFZ6 572 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Grpel1Q99LP6 217 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ano10Q8BH79 659 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 CarsQ9ER72 831 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms