RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Ctdp1Q7TSG2 960 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Chaf1aQ9QWF0 911 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Fyb1O35601 819 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Bbof1Q3V079 533 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ddx46Q569Z5 1032 aaKnown RBP9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Utp18Q5SSI6 552 aaKnown RBP9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Rhot2Q8JZN7 620 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Themis2Q91YX0 663 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Magi1Q6RHR9 1471 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Tex13c2A0A0G2JGA3 530 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 TbcaP48428 108 aaKnown RBP9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 LyarQ08288 388 aaKnown RBP9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Wdr93Q402B2 695 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Atp1a3Q6PIC6 1013 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Znf526Q8BI66 675 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Zcchc11B2RX14 1644 aaKnown RBP9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Dhx8A2A4P0 1244 aaKnown RBP9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Dnai2A2AC93 623 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Gm21671G3UY31 267 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Nbr1P97432 988 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Washc4Q3UMB9 1173 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Btbd11Q6GQW0 1109 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Fam177a1Q8BR63 207 aa9.67□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Actn3O88990 900 aaKnown RBP9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Samsn1P57725 372 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ncbp1Q3UYV9 790 aaKnown RBP9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 GpkowQ56A08 488 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ctr9Q62018 1173 aaKnown RBP9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Abcf1Q6P542 837 aaKnown RBP9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Zscan22Q8BGS5 496 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Dennd6aQ8BH65 605 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ttc19Q8CC21 365 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Wdr24Q8CFJ9 790 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Dydc1Q9D9T0 175 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Idi2Q8BFZ6 227 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Klhl30Q8C3F7 581 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Mtmr3Q8K296 1196 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Slc52a2Q9D8F3 450 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Baiap2l1Q9DBJ3 514 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Usp19Q3UJD6 1360 aa9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Cpsf1Q9EPU4 1441 aaKnown RBP9.66□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Dnajc25A2ALW5 357 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Mdm2P23804 489 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Atp8b2P98199 1209 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ifit2Q64112 472 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Afap1Q80YS6 731 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Vps16Q920Q4 839 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Erc1Q99MI1 1120 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Mrpl44Q9CY73 333 aaKnown RBP9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Mcmdc2E9Q956 681 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Trap1aP19473 224 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Zranb3Q6NZP1 1069 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 AidaQ8C4Q6 305 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Sdc2P43407 202 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ccdc57Q6PHN1 1016 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Golim4Q8BXA1 655 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Cfap45Q9D9U9 551 aa9.65□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Fam170aQ66LM6 333 aa9.65□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Trak2Q6P9N8 913 aa9.65□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Cep55Q8BT07 462 aa9.65□□□□□ -0.87
Smarca1-203ENSMUST00000101616 RalylQ8BTF8 293 aa9.65□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Tex19.1Q99MV2 351 aa9.65□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Atp1a4Q9WV27 1032 aa9.65□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ccdc141E9Q8Q6 1531 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Snap23O09044 210 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Zfpm1O35615 995 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Irx2P81066 474 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ifit1Q64282 463 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ankib1Q6ZPS6 1085 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ppm1eQ80TL0 749 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 U2af1l4Q8BGJ9 220 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ccdc43Q9CR29 222 aaKnown RBP9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Klhl10Q9D5V2 608 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Abca5Q8K448 1642 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 DroshaQ5HZJ0 1373 aaKnown RBP9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Gm7361D3Z6R1 267 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ppfibp1Q8C8U0 969 aaKnown RBP9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Kif2cQ922S8 721 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ccdc39Q9D5Y1 937 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Lztfl1Q9JHQ5 299 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Tex14Q7M6U3 1450 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Gm1979E9QAN3 267 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ccdc191J3QQ27 883 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Dctn1O08788 1281 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Tnni2P13412 182 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Gjc1P28229 396 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 EspnlQ3UYR4 1005 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ppp4r3bQ922R5 820 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ak2Q9WTP6 239 aa9.64□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Kiaa1107Q80TK0 1369 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ccdc155Q80VJ8 648 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Mx2Q9WVP9 655 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Trappc8E9PWG2 1437 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Ttc21aQ8C0S4 1314 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Plb1Q3TTY0 1478 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Dnm1P39053 867 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Capza3P70190 299 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Tspyl3Q3UYP3 334 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 LarsQ8BMJ2 1178 aa9.63□□□□□ -0.87
Smarca1-203ENSMUST00000101616 Als2cr12Q8BVM7 383 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms