RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Smim5Q8BT42 78 aa12.59□□□□□ -0.39
Ccdc87-201ENSMUST00000088653 Nav1Q8CH77 1875 aa12.58□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Ms4a2P20490 235 aa12.58□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Syde2E9PUP1 1314 aa12.58□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Ssh1Q76I79 1042 aa12.58□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Brf1Q8CFK2 676 aa12.58□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 AnlnQ8K298 1121 aaKnown RBP12.58□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Sf3a1Q8K4Z5 791 aaKnown RBP12.58□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Brpf1B2RRD7 1212 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Stk11ipQ3TAA7 1072 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Pde3bQ61409 1100 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Rad50P70388 1312 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Kat6bQ8BRB7 1872 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Tnrc6cQ3UHC0 1690 aaKnown RBP12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Cers3Q1A3B0 383 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Fkbp5Q64378 456 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Tmem87bQ8BKU8 555 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Lrp6O88572 1613 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 NmiO35309 314 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Dmrtc1Q9D9R7 182 aa12.57□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Casz1Q9CWL2 1761 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Vwa3bJ9JI28 736 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Ets1P27577 440 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Gnat3Q3V3I2 354 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Stk3Q9JI10 497 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Tbc1d4Q8BYJ6 1307 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Kcnh4A2A5F7 1018 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 GpkowQ56A08 488 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Adora1Q60612 326 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Soga3Q6NZL0 945 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Zkscan1Q8BGS3 561 aaKnown RBP12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Mylk2Q8VCR8 613 aa12.56□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 4933416C03RikQ3V063 378 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Abca3Q8R420 1704 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Ric1Q69ZJ7 1422 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 AtrnQ9WU60 1428 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 EspnlQ3UYR4 1005 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Tshz3Q8CGV9 1081 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Edc3Q8K2D3 508 aaKnown RBP12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Zeb2Q9R0G7 1215 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Arap2Q8BZ05 1703 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 AK157302I3ITR1 129 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Isca1Q9D924 129 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Ehd4Q9EQP2 541 aa12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Bag3Q9JLV1 577 aaKnown RBP12.55□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Ppfia1B2RXQ2 1266 aa12.54□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 AbraQ8BUZ1 375 aa12.54□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Mlh1Q9JK91 760 aa12.54□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Jakmip1Q8BVL9 626 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Gimap5Q8BWF2 308 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Ccdc7Q9D541 371 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Sos2Q02384 1333 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Gm12185Q5NCB2 835 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 NexnQ7TPW1 607 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Slc26a8Q8R0C3 999 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Kndc1Q0KK55 1742 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Mcm4P49717 862 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Ccnl1Q52KE7 532 aaKnown RBP12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Bloc1s4Q8VED2 215 aa12.53□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Mast2Q60592 1734 aa12.52□□□□□ -0.4
Ccdc87-201ENSMUST00000088653 Smarce1O54941 411 aaKnown RBP12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 DiexfQ8BTT6 772 aaKnown RBP12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Top1mtQ8R4U6 593 aa12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Cwc25Q9DBF7 416 aa12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Ltb4r2Q9JJL9 360 aa12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Ybx3Q9JKB3 361 aaKnown RBP12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Pdzrn3Q69ZS0 1063 aa12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Cap2Q9CYT6 476 aa12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Add2Q9QYB8 725 aa12.52□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Plcb2A3KGF7 1181 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Utp18Q5SSI6 552 aaKnown RBP12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 4930504O13RikQ8C5Z9 145 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Rhot2Q8JZN7 620 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 KinQ8K339 391 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 ApobrQ8VBT6 942 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Lrrc59Q922Q8 307 aaKnown RBP12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Stard3nlQ9DCI3 235 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 EvcP57680 1005 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Atp6v1dP57746 247 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Ppp4r3aQ6P2K6 820 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Znf526Q8BI66 675 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Bag4Q8CI61 457 aa12.51□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Mst1rQ62190 1378 aa12.5□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Phactr2B1AVP0 632 aa12.5□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Nlrp1aQ2LKU9 1182 aa12.5□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Zbtb45Q52KG4 520 aa12.5□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 PtmsQ9D0J8 101 aaKnown RBP12.5□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Myd88P22366 296 aa12.5□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Smg7Q5RJH6 1138 aaKnown RBP12.5□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Ddx11Q6AXC6 880 aa12.5□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Zdhhc9P59268 364 aa12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 DbnlQ62418 436 aa12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Ints3Q7TPD0 1041 aaKnown RBP12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Q8C5K5 320 aa12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Dis3l2Q8CI75 870 aaKnown RBP12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Il1rapl2Q9ERS6 686 aa12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Fer1l6E0CZ42 1862 aa12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Prl3d3A0A0M6L0J6 224 aa12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Strn4P58404 760 aa12.49□□□□□ -0.41
Ccdc87-201ENSMUST00000088653 Sik1Q60670 779 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms