RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Larp1Q6ZQ58 1072 aaKnown RBP21.91■■□□□ 1.1
Upf1-201ENSMUST00000075666 Ccdc181Q80ZU5 509 aa21.91■■□□□ 1.1
Upf1-201ENSMUST00000075666 Kcnn1Q9EQR3 537 aa21.91■■□□□ 1.1
Upf1-201ENSMUST00000075666 Zkscan5Q9Z1D8 819 aa21.91■■□□□ 1.1
Upf1-201ENSMUST00000075666 Gm21671G3UY31 267 aa21.91■■□□□ 1.1
Upf1-201ENSMUST00000075666 Dnajc2P54103 621 aaKnown RBP21.91■■□□□ 1.1
Upf1-201ENSMUST00000075666 Mbd5B1AYB6 1498 aa21.9■■□□□ 1.1
Upf1-201ENSMUST00000075666 Rad50P70388 1312 aa21.9■■□□□ 1.1
Upf1-201ENSMUST00000075666 Pafah1b1P63005 410 aaKnown RBP21.9■■□□□ 1.1
Upf1-201ENSMUST00000075666 Abl1P00520 1123 aa21.9■■□□□ 1.1
Upf1-201ENSMUST00000075666 Tmem67Q8BR76 992 aa21.9■■□□□ 1.1
Upf1-201ENSMUST00000075666 Ccdc158Q8CDI6 1109 aa21.9■■□□□ 1.1
Upf1-201ENSMUST00000075666 Prim1P20664 417 aa21.9■■□□□ 1.1
Upf1-201ENSMUST00000075666 Ppm1eQ80TL0 749 aa21.89■■□□□ 1.1
Upf1-201ENSMUST00000075666 Ccdc73Q8CDM4 1066 aa21.89■■□□□ 1.1
Upf1-201ENSMUST00000075666 Mlh1Q9JK91 760 aa21.89■■□□□ 1.1
Upf1-201ENSMUST00000075666 Tm6sf1P58749 370 aa21.89■■□□□ 1.1
Upf1-201ENSMUST00000075666 Chaf1aQ9QWF0 911 aa21.89■■□□□ 1.1
Upf1-201ENSMUST00000075666 Zranb3Q6NZP1 1069 aa21.88■■□□□ 1.09
Upf1-201ENSMUST00000075666 Sh3bp1P55194 680 aa21.88■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ccdc12Q8R344 166 aaKnown RBP21.88■■□□□ 1.09
Upf1-201ENSMUST00000075666 Scaf11E9PZM7 1456 aaKnown RBP21.88■■□□□ 1.09
Upf1-201ENSMUST00000075666 Hoxb7P09024 217 aa21.88■■□□□ 1.09
Upf1-201ENSMUST00000075666 Gsdma2Q32M21 443 aa21.88■■□□□ 1.09
Upf1-201ENSMUST00000075666 GpkowQ56A08 488 aa21.88■■□□□ 1.09
Upf1-201ENSMUST00000075666 Trim11Q99PQ2 467 aa21.88■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ifit2Q64112 472 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Cep55Q8BT07 462 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ccdc39Q9D5Y1 937 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Atp8b3Q6UQ17 1335 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Mmp8O70138 465 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Nphp4P59240 1425 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Kdm5cP41230 1554 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Bach1P97302 739 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Rrs1Q9CYH6 365 aaKnown RBP21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ankib1Q6ZPS6 1085 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Iqca1Q9CUL5 857 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Tubb4aQ9D6F9 444 aa21.87■■□□□ 1.09
Upf1-201ENSMUST00000075666 Pip4k2aO70172 405 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 Rufy3Q9D394 469 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 Washc4Q3UMB9 1173 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ccdc150Q8CDI7 1110 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 DonsonQ9QXP4 560 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 Zscan29E9Q5B4 869 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 Krt84Q99M73 603 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 Echdc1Q9D9V3 322 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 March6Q6ZQ89 909 aa21.86■■□□□ 1.09
Upf1-201ENSMUST00000075666 Cnpy2Q9QXT0 182 aa21.85■■□□□ 1.09
Upf1-201ENSMUST00000075666 Irf5P56477 497 aa21.85■■□□□ 1.09
Upf1-201ENSMUST00000075666 Cep120Q7TSG1 988 aa21.85■■□□□ 1.09
Upf1-201ENSMUST00000075666 Gm9992B2RWK3 458 aa21.85■■□□□ 1.09
Upf1-201ENSMUST00000075666 Unc93aQ710D3 458 aa21.85■■□□□ 1.09
Upf1-201ENSMUST00000075666 Pnpla2Q8BJ56 486 aa21.85■■□□□ 1.09
Upf1-201ENSMUST00000075666 Dctn1O08788 1281 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Zscan22Q8BGS5 496 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Prune1Q8BIW1 454 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Znf521Q6KAS7 1311 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Col17a1Q07563 1470 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Eif4a2P10630 407 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ak2Q9WTP6 239 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ccdc121E9Q6D3 323 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Map3k2Q61083 619 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ltv1Q6NSQ7 470 aaKnown RBP21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Gnl3lQ6PGG6 577 aaKnown RBP21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Tsr2Q8C8T8 191 aa21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Dhx30Q99PU8 1217 aaKnown RBP21.84■■□□□ 1.09
Upf1-201ENSMUST00000075666 Ppp1r10Q80W00 888 aaKnown RBP21.83■■□□□ 1.09
Upf1-201ENSMUST00000075666 Brd3Q8K2F0 726 aaKnown RBP21.83■■□□□ 1.09
Upf1-201ENSMUST00000075666 Rbm33Q9CXK9 1231 aaKnown RBP21.83■■□□□ 1.09
Upf1-201ENSMUST00000075666 Lmbr1Q9JIT0 490 aa21.83■■□□□ 1.09
Upf1-201ENSMUST00000075666 Tpx2A2APB8 745 aaKnown RBP21.83■■□□□ 1.09
Upf1-201ENSMUST00000075666 Slc13a4Q8BZ82 625 aa21.83■■□□□ 1.09
Upf1-201ENSMUST00000075666 Gm7361D3Z6R1 267 aa21.83■■□□□ 1.08
Upf1-201ENSMUST00000075666 Q8BT18 775 aa21.83■■□□□ 1.08
Upf1-201ENSMUST00000075666 Znf653Q6YND2 615 aa21.83■■□□□ 1.08
Upf1-201ENSMUST00000075666 Tmx1Q8VBT0 278 aa21.83■■□□□ 1.08
Upf1-201ENSMUST00000075666 Plch2A2AP18 1501 aa21.82■■□□□ 1.08
Upf1-201ENSMUST00000075666 Stim1P70302 685 aa21.82■■□□□ 1.08
Upf1-201ENSMUST00000075666 TbcaP48428 108 aaKnown RBP21.82■■□□□ 1.08
Upf1-201ENSMUST00000075666 Pabpn1Q8CCS6 302 aaKnown RBP21.82■■□□□ 1.08
Upf1-201ENSMUST00000075666 Ier5O89113 308 aa21.82■■□□□ 1.08
Upf1-201ENSMUST00000075666 Zscan20B2KFW1 1030 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Vwa3bJ9JI28 736 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Mtx1P47802 317 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Baiap2l1Q9DBJ3 514 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Gapvd1Q6PAR5 1458 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 PalldQ9ET54 1408 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Fkbp5Q64378 456 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Wasf1Q8R5H6 559 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 4930548H24RikQ9D496 437 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Ttc19Q8CC21 365 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Q3UJC8 639 aa21.81■■□□□ 1.08
Upf1-201ENSMUST00000075666 Pde1cQ64338 706 aa21.8■■□□□ 1.08
Upf1-201ENSMUST00000075666 Tbc1d31Q6NXY1 996 aa21.8■■□□□ 1.08
Upf1-201ENSMUST00000075666 Rbm42Q91V81 474 aaKnown RBP21.8■■□□□ 1.08
Upf1-201ENSMUST00000075666 Edc4Q3UJB9 1406 aaKnown RBP21.8■■□□□ 1.08
Upf1-201ENSMUST00000075666 Abca5Q8K448 1642 aa21.8■■□□□ 1.08
Upf1-201ENSMUST00000075666 Zbtb21E9Q444 1094 aa21.79■■□□□ 1.08
Upf1-201ENSMUST00000075666 Smarcc1P97496 1104 aa21.79■■□□□ 1.08
Upf1-201ENSMUST00000075666 Gm1979E9QAN3 267 aa21.79■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms