RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cwc27Q3TKY6 469 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Cd248Q91V98 765 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Rnaseh2aQ9CWY8 301 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Igf2rQ07113 2483 aaKnown RBP8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Maco1Q7TQE6 664 aaKnown RBP8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Emilin1Q99K41 1017 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Popdc2Q9ES82 367 aa8.54□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Ddx58Q6Q899 926 aa8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Col1a2Q01149 1372 aa8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Igfbp6P47880 238 aa8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Tceal9Q9DD24 104 aa8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Ccdc171E9Q1U1 1324 aa8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Mon2Q80TL7 1715 aa8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Anxa1P10107 346 aaKnown RBP8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Hsp90ab1P11499 724 aaKnown RBP8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Dnttip2Q8R2M2 758 aaKnown RBP8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Akap11E9Q777 1895 aa8.53□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Kcnh8P59111 1102 aa8.52□□□□□ -1.04
Bdnf-201ENSMUST00000053317 SnrkQ8VDU5 748 aa8.52□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Eif2s2Q99L45 331 aaKnown RBP8.52□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Ppp1r3fQ9JIG4 799 aa8.52□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Pde3aQ9Z0X4 1141 aa8.52□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Usp19Q3UJD6 1360 aa8.52□□□□□ -1.04
Bdnf-201ENSMUST00000053317 Crb1Q8VHS2 1405 aa8.52□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Nolc1E9Q5C9 702 aaKnown RBP8.52□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Spire2Q8K1S6 718 aa8.52□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Rad23bP54728 416 aa8.52□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Col23a1Q8K4G2 532 aa8.52□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Rrs1Q9CYH6 365 aaKnown RBP8.52□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Kifc2O08672 792 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 L3mbtl2P59178 703 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Znf697Q569E7 569 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Ttc5Q99LG4 440 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 LratQ9JI60 231 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Plcb2A3KGF7 1181 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Cyp2c68K7N6C2 491 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Atp6v1aP50516 617 aaKnown RBP8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 IntuQ059U7 942 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Susd4Q8BH32 490 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Sde2Q8K1J5 448 aaKnown RBP8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Slc14a2Q8R4T9 930 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Mylk2Q8VCR8 613 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Kcnq2Q9Z351 759 aa8.51□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Atf5O70191 283 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 MycnP03966 462 aaKnown RBP8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Tspyl2Q7TQI8 677 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Fam213aQ9CYH2 218 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Ubr1O70481 1757 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Ccdc146E9Q9F7 977 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Terf1P70371 421 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 B4galnt3Q6L8S8 986 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Gpr150Q8BL07 427 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Trim58Q5NCC9 485 aa8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Pdia6Q922R8 440 aaKnown RBP8.5□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Brpf1B2RRD7 1212 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Casp1P29452 402 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Ppm1gQ61074 542 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Znf219Q6IQX8 726 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Zbtb40Q6PCS8 1258 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Kif2cQ922S8 721 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Taf1dQ9D4V4 322 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Rab3gap1Q80UJ7 981 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Mtfr1lQ9CWE0 289 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Abcc12Q80WJ6 1366 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Uhrf1bp1B2KF50 1429 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Prkar2bP31324 416 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Pa2g4P50580 394 aaKnown RBP8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Srgap3Q812A2 1099 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Wnk3Q80XP9 1757 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Plekhh1Q80TI1 1356 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Zdbf2Q5SS00 2493 aaKnown RBP8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Ttc21aQ8C0S4 1314 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Grm8P47743 908 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Tmem143Q8VD26 458 aa8.49□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Prdm11A2AGX3 565 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Gnai2P08752 355 aaKnown RBP8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 IarsQ8BU30 1262 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Noc3lQ8VI84 807 aaKnown RBP8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Shank2Q80Z38 1476 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Cnksr1A2A9K7 700 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Olfr247E9PVJ7 320 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Dhx16G3X8X0 1044 aaKnown RBP8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Olfr819K7N727 320 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Cers3Q1A3B0 383 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Aldh1l1Q8R0Y6 902 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Sos2Q02384 1333 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Map2P20357 1828 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Htatsf1Q8BGC0 757 aa8.48□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Ltbp1Q8CG19 1712 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Nol8Q3UHX0 1147 aaKnown RBP8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Gnat3Q3V3I2 354 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Naa16Q9DBB4 864 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Nup153E9Q3G8 1462 aaKnown RBP8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Cct4P80315 539 aaKnown RBP8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Podxl2Q8CAE9 603 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Znrd1-asQ8R0E5 213 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 PtmaP26350 111 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 CoilQ5SU73 570 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Ciapin1Q8WTY4 309 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Chmp4bQ9D8B3 224 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms