RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Paip2Q9D6V8 124 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Slx4ipQ9D7Y9 413 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Mkrn1Q9QXP6 481 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Evi5lH3BKQ3 813 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Zfpm1O35615 995 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Q3UJC8 639 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Cep63Q3UPP8 700 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Stac3Q8BZ71 360 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Rab3il1Q8VDV3 383 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Cnpy2Q9QXT0 182 aa8.17□□□□□ -1.1
Smc1a-201ENSMUST00000045312 AU019823E9PUQ3 292 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Zfp597E9Q6S0 419 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Bach1P97302 739 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Map4k4P97820 1233 aaKnown RBP8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Ccdc162pQ0VG85 912 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Nxf2Q4ZGD8 691 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Erc1Q99MI1 1120 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Ankrd1Q9CR42 319 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Clul1Q3ZRW6 464 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Frat2Q8K025 231 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 FanclQ9CR14 375 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Ndufa8Q9DCJ5 172 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Pdia3P27773 505 aaKnown RBP8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Map3k11Q80XI6 850 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Noc3lQ8VI84 807 aaKnown RBP8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Rlbp1Q9Z275 317 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Arhgef40Q3UPH7 1517 aa8.16□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Card6E9PWH2 1175 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Ggnbp2Q5SV77 696 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 PsapQ61207 557 aaKnown RBP8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Ccdc148Q6P5U8 527 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Atp1a2Q6PIE5 1020 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Fam13aQ8BGI4 693 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 TkfcQ8VC30 578 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Dpf1Q9QX66 387 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Gm45015A0A140LII9 184 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Stim1P70302 685 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Cplx4Q80WM3 160 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Mrps27Q8BK72 415 aaKnown RBP8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Commd10Q8JZY2 202 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Brd3Q8K2F0 726 aaKnown RBP8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Ppp1r42Q8R1Z4 357 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Rufy2Q8R4C2 606 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Ppfibp2O35711 882 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 MpripP97434 1024 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 4921504E06RikQ8CET2 560 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Tceanc2Q8R2M0 207 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Rnf34Q99KR6 376 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Tubb4aQ9D6F9 444 aa8.15□□□□□ -1.1
Smc1a-201ENSMUST00000045312 Atp2b1G5E829 1220 aa8.15□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Map3k13Q1HKZ5 959 aa8.15□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Esyt1Q3U7R1 1092 aaKnown RBP8.15□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ccdc114Q3UX62 658 aa8.15□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Gnl3lQ6PGG6 577 aaKnown RBP8.15□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ebag9Q9D0V7 213 aa8.15□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Gcc2Q8CHG3 1679 aa8.15□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Supt6hQ62383 1726 aaKnown RBP8.15□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Adgrb2Q8CGM1 1561 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ccdc121E9Q6D3 323 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Abl1P00520 1123 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Zranb3Q6NZP1 1069 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ctdp1Q7TSG2 960 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 SncbQ91ZZ3 133 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Smc1aQ9CU62 1233 aaKnown RBP8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Mis12Q9CY25 206 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 TnikP83510 1323 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Znf568E9PYI1 671 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Cpsf2O35218 782 aaKnown RBP8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Atp2b3Q0VF55 1220 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Adck5Q80V03 582 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 PpanQ91YU8 470 aaKnown RBP8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ssr1Q9CY50 286 aaKnown RBP8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 CenppQ9CZ92 286 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Lztfl1Q9JHQ5 299 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Plekhd1B2RPU2 505 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Zscan29E9Q5B4 869 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Cct2P80314 535 aaKnown RBP8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Limch1Q3UH68 1057 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Kdm4cQ8VCD7 1054 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Mipol1Q9D9F8 279 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 PalmQ9Z0P4 383 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Cpsf1Q9EPU4 1441 aaKnown RBP8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Lrrc9Q8CDN9 1456 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Sos1Q62245 1319 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ankrd44B2RXR6 993 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Exoc3l2D3YUP5 789 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ppp1r15aP17564 657 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 F2rP30558 430 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Nucb1Q02819 459 aaKnown RBP8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Uspl1Q3ULM6 1089 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Sdad1Q80UZ2 687 aaKnown RBP8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ppp2r3dQ9Z176 491 aa8.14□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Lrriq1Q0P5X1 1673 aa8.13□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Hdhd2Q3UGR5 259 aa8.13□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Ankrd40Q5SUE8 363 aa8.13□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Agtpbp1Q641K1 1218 aa8.13□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Cep120Q7TSG1 988 aa8.13□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Polr3dQ91WD1 398 aa8.13□□□□□ -1.11
Smc1a-201ENSMUST00000045312 PtprgQ05909 1442 aa8.13□□□□□ -1.11
Smc1a-201ENSMUST00000045312 Actn3O88990 900 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms