RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Ehd4Q9EQP2 541 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Myh7Q91Z83 1935 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Rfx1P48377 963 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 RubcnlQ3TD16 648 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Utp18Q5SSI6 552 aaKnown RBP11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 4933402E13RikQ9D4D2 429 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Fbxl16A2RT62 479 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 AK157302I3ITR1 129 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Casq1O09165 405 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Zbtb40Q6PCS8 1258 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 AnlnQ8K298 1121 aaKnown RBP11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Lmbr1lQ9D1E5 489 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Isca1Q9D924 129 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 TefQ9JLC6 301 aa11.15□□□□□ -0.62
Ctnna1-201ENSMUST00000042345 Cfdp1O88271 295 aaKnown RBP11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Zkscan1Q8BGS3 561 aaKnown RBP11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Mylk2Q8VCR8 613 aa11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 ZyxQ62523 564 aa11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Isy1Q69ZQ2 285 aaKnown RBP11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Zranb3Q6NZP1 1069 aa11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Cfap44E9Q5M6 1843 aa11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Mst1rQ62190 1378 aa11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Efcab2Q9CQ46 164 aa11.14□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 FAM186AQ9D9R9 1790 aa11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Kcnh4A2A5F7 1018 aa11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Ankle2Q6P1H6 964 aa11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Fam102bQ8BQS4 339 aa11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Bag4Q8CI61 457 aa11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 C4bP01029 1738 aa11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Pa2g4P50580 394 aaKnown RBP11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Sf3a1Q8K4Z5 791 aaKnown RBP11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Txnrd1Q9JMH6 613 aa11.13□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Ssc5dQ8BV57 1371 aa11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 1700006A11RikB9EHI3 544 aa11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Elmsan1E9Q2I4 1089 aaKnown RBP11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Cers3Q1A3B0 383 aa11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Map3k13Q1HKZ5 959 aa11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Dmrt2Q8BG36 561 aa11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Pdzrn3Q69ZS0 1063 aa11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Sp8Q8BMJ8 486 aa11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Fam50bQ9WTJ8 334 aa11.12□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Ppfia1B2RXQ2 1266 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Mlh1Q9JK91 760 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Scn11aQ9R053 1765 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Syde2E9PUP1 1314 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Cacna1sQ02789 1880 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Gm45015A0A140LII9 184 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Gm18336A0A140LIU8 765 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Hspa2P17156 633 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Slc5a1Q8C3K6 665 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Bmp2kQ91Z96 1138 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Strn4P58404 760 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Ddx58Q6Q899 926 aa11.11□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Phrf1A6H619 1682 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 EspnlQ3UYR4 1005 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Ddx19aQ61655 478 aaKnown RBP11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Tmem87bQ8BKU8 555 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Bcl2l13P59017 434 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Nlrp1aQ2LKU9 1182 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Flad1Q8R123 492 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Gripap1Q8VD04 806 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Ltb4r2Q9JJL9 360 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Atg9aQ68FE2 551 aa11.1□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 DaxxO35613 739 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Ets1P27577 440 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Adora1Q60612 326 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 NexnQ7TPW1 607 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Nhsl1Q8CAF4 1587 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Rasa1E9PYG6 1038 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Tbc1d30Q69ZT9 766 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Tmx3Q8BXZ1 456 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Brf1Q8CFK2 676 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Nphp3Q7TNH6 1325 aa11.09□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Cnnm1Q0GA42 951 aa11.08□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Sgsm2Q80U12 1005 aa11.08□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Slc39a6Q8C145 765 aa11.08□□□□□ -0.63
Ctnna1-201ENSMUST00000042345 Myh1Q5SX40 1942 aa11.08□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 ArxO35085 564 aa11.08□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Zpr1Q62384 459 aa11.08□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 DbnlQ62418 436 aa11.08□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Ifit2Q64112 472 aa11.08□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Edc3Q8K2D3 508 aaKnown RBP11.08□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Gdpd2Q9ESM6 539 aa11.08□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 MetP16056 1379 aa11.08□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 EvcP57680 1005 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Slc4a10Q5DTL9 1118 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Rufy3Q9D394 469 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Col3a1P08121 1464 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Gnat3Q3V3I2 354 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Ppp4r3aQ6P2K6 820 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Gm21663A0A0G2JE01 267 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Gm7361D3Z6R1 267 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 5031410I06RikE9Q4E0 267 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Gm1979E9QAN3 267 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Gm5862K7N5V5 267 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Gm10220K7N660 267 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 NmiO35309 314 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 ImpactO55091 318 aa11.07□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 MccE9PWI3 1003 aa11.06□□□□□ -0.64
Ctnna1-201ENSMUST00000042345 Znf526Q8BI66 675 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms