RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 RalylQ8BTF8 293 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Zmym4A2A791 1549 aaKnown RBP11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ampd3O08739 766 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ccdc112A0AUP1 442 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Dapk3O54784 448 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Tbc1d2bQ3U0J8 965 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Trim27Q62158 513 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 NsmfQ99NF2 532 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Znf287Q9EQB9 759 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Dnm1P39053 867 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Traf3ip1Q149C2 625 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Sh3d21Q7TSG5 549 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Slx4ipQ9D7Y9 413 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Plb1Q3TTY0 1478 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 U2af1l4Q8BGJ9 220 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Skor1Q8BX46 964 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Tmx4Q8C0L0 335 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Stx8O88983 236 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Als2cr12Q8BVM7 383 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Jmjd4Q8BFT6 427 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Srgap1Q91Z69 1062 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Hmg20bQ9Z104 317 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ankrd40Q5SUE8 363 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Nol11Q8BJW5 723 aaKnown RBP11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Chd1lQ9CXF7 900 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 F2rP30558 430 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Mcm6P97311 821 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Idi2Q8BFZ6 227 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Krt23Q99PS0 422 aa11.31□□□□□ -0.6
Syne1-201ENSMUST00000041639 Rbm8a2A0A0N4SUH6 174 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Fam177a1Q8BR63 207 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Rbm8aQ9CWZ3 174 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Nsfl1cQ9CZ44 370 aaKnown RBP11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Neo1P97798 1493 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ppp1r21Q3TDD9 780 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Fam170aQ66LM6 333 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ano10Q8BH79 659 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Atp2b1G5E829 1220 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Zhx1P70121 873 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Fam107bQ3TGF2 131 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Kmt5bQ3U8K7 883 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Fam83gQ5SWY7 812 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Cyp7a1Q64505 503 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Naa15Q80UM3 865 aaKnown RBP11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Nop53Q8BK35 484 aaKnown RBP11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Cwc25Q9DBF7 416 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Slf2Q6P9P0 1278 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 DymQ8CHY3 669 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Klc3Q91W40 508 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Echdc1Q9D9V3 322 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Olr1Q9EQ09 363 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Hdhd2Q3UGR5 259 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Triml1Q8BVP1 470 aa11.3□□□□□ -0.6
Syne1-201ENSMUST00000041639 Pdia3P27773 505 aaKnown RBP11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Rbbp8nlA2ABX0 614 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Vps37cQ8R105 352 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Fam135aQ6NS59 1506 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Caskin1Q6P9K8 1431 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Mrc2Q64449 1479 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Syt10Q9R0N4 523 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Serpinb6bO08804 377 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Cdan1Q8CC12 1239 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Tex19.1Q99MV2 351 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ttc21aQ8C0S4 1314 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 RalgapbQ8BQZ4 1484 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 AqrQ8CFQ3 1481 aaKnown RBP11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Wdhd1P59328 1117 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Smco2Q9DA21 347 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ktn1Q61595 1327 aaKnown RBP11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Rfx7F8VPJ6 1459 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Gm21985Q6P6P5 1106 aa11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Mybbp1aQ7TPV4 1344 aaKnown RBP11.29□□□□□ -0.6
Syne1-201ENSMUST00000041639 Zfp42P22227 288 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 CalcaP70160 136 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Hook3Q8BUK6 718 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 2310002L09RikQ9D7L5 217 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Frmpd1A2AKB4 1549 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ankle2Q6P1H6 964 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Iffo1Q8BXL9 562 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Prpf40aQ9R1C7 953 aaKnown RBP11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Dph6Q9CQ28 267 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 GmnnO88513 206 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ifit1bl2Q3U687 466 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Tmem132eQ6IEE6 982 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ptcd1Q8C2E4 695 aaKnown RBP11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Camsap1A2AHC3 1581 aa11.28□□□□□ -0.6
Syne1-201ENSMUST00000041639 Cdca8Q8BHX3 289 aa11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Klhl30Q8C3F7 581 aa11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Krt25Q8VCW2 446 aa11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Smc1aQ9CU62 1233 aaKnown RBP11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Gm10093D3YYI8 482 aa11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Hdac1O09106 482 aaKnown RBP11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Smarcc1P97496 1104 aa11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Mrps27Q8BK72 415 aaKnown RBP11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Cul5Q9D5V5 780 aa11.27□□□□□ -0.6
Syne1-201ENSMUST00000041639 Speer4dL7N216 212 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Rnf216P58283 853 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Akap2O54931 893 aa11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ssrp1Q08943 708 aaKnown RBP11.27□□□□□ -0.61
Syne1-201ENSMUST00000041639 Matr3Q8K310 846 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms