RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Mapk4Q6P5G0 583 aa6.59□□□□□ -1.35
Clk1-201ENSMUST00000034868 Fbxo22Q78JE5 402 aa6.59□□□□□ -1.35
Clk1-201ENSMUST00000034868 Cldn10Q9Z0S6 231 aa6.59□□□□□ -1.35
Clk1-201ENSMUST00000034868 Lzts3A2AHG0 700 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 Rab6bP61294 208 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 Irf3P70671 419 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 RubcnlQ3TD16 648 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 Map4k5Q8BPM2 847 aaKnown RBP6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 Atxn7Q8R4I1 867 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ddx27Q921N6 760 aaKnown RBP6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ggt7Q99JP7 662 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 Pagr1aQ99L02 253 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 Rfc5Q9D0F6 339 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 BicraF8VPZ9 1578 aa6.58□□□□□ -1.36
Clk1-201ENSMUST00000034868 IghaA0A0A6YXW6 389 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 A0A1L1SQF0 893 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Zfyve27Q3TXX3 415 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ripor2Q80U16 1078 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ppme1Q8BVQ5 386 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 OsgepQ8BWU5 335 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Fam221bQ8C627 487 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Jph1Q9ET80 660 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Map3k14Q9WUL6 942 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ap3b1Q9Z1T1 1105 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Bicdl1A0JNT9 577 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Qtrt2B8ZXI1 415 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Pik3r2O08908 722 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Larp7Q05CL8 570 aaKnown RBP6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Abhd15Q5F2F2 459 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Kcnt1Q6ZPR4 1224 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 Fam83dQ9D7I8 585 aa6.57□□□□□ -1.36
Clk1-201ENSMUST00000034868 MccE9PWI3 1003 aa6.56□□□□□ -1.36
Clk1-201ENSMUST00000034868 CblbQ3TTA7 982 aa6.56□□□□□ -1.36
Clk1-201ENSMUST00000034868 Sytl5Q80T23 753 aa6.56□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ddx54Q8K4L0 874 aaKnown RBP6.56□□□□□ -1.36
Clk1-201ENSMUST00000034868 Cdca7lQ922M5 438 aa6.56□□□□□ -1.36
Clk1-201ENSMUST00000034868 Bcs1lQ9CZP5 418 aa6.56□□□□□ -1.36
Clk1-201ENSMUST00000034868 C1qtnf2Q9D8U4 294 aa6.56□□□□□ -1.36
Clk1-201ENSMUST00000034868 Kdm5dQ62240 1548 aa6.56□□□□□ -1.36
Clk1-201ENSMUST00000034868 Crybg2B7ZCC2 1516 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 1700017N19RikA0A087WPJ1 469 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 Bfsp1A2AMT1 669 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 Nolc1E9Q5C9 702 aaKnown RBP6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 NpcdF8VQB8 469 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 Gm2056J3QQ02 144 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 L3mbtl2P59178 703 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 Dennd1bQ3U1T9 766 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 Slc4a7Q8BTY2 1034 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 Fgd2Q8BY35 655 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 PolkQ9QUG2 852 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 NacadQ5SWP3 1504 aa6.55□□□□□ -1.36
Clk1-201ENSMUST00000034868 A030005L19RikA0A1Y7VIU2 113 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 PdgfrbP05622 1098 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Tnni2P13412 182 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Col19a1Q0VF58 1136 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Nudt18Q3U2V3 323 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ppm1gQ61074 542 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 LnpkQ7TQ95 425 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ufsp1Q9CZP0 217 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Polr3eQ9CZT4 710 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Nop56Q9D6Z1 580 aaKnown RBP6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Mrps9Q9D7N3 390 aaKnown RBP6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Tmem225Q9D9S2 230 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Upf1Q9EPU0 1124 aaKnown RBP6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Cdk2ap1O35207 114 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Cd63P41731 238 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Sox18P43680 377 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Tlr7P58681 1050 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Fam193bQ3U2K0 892 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Plekhg5Q66T02 1073 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ap4e1Q80V94 1122 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ccdc116Q80X53 541 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Q8CC96 669 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 McamQ8R2Y2 648 aaKnown RBP6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Epn3Q91W69 636 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 PtmsQ9D0J8 101 aaKnown RBP6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Fam174aQ9D3L0 190 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ube3bQ9ES34 1070 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 Cables1Q9ESJ1 568 aa6.54□□□□□ -1.36
Clk1-201ENSMUST00000034868 TonslQ6NZL6 1363 aa6.53□□□□□ -1.36
Clk1-201ENSMUST00000034868 Dnajc2P54103 621 aaKnown RBP6.53□□□□□ -1.36
Clk1-201ENSMUST00000034868 Mon1aQ6PDG8 556 aa6.53□□□□□ -1.36
Clk1-201ENSMUST00000034868 Ccar1Q8CH18 1146 aaKnown RBP6.53□□□□□ -1.36
Clk1-201ENSMUST00000034868 Supt16hQ920B9 1047 aa6.53□□□□□ -1.36
Clk1-201ENSMUST00000034868 Krtap3-2Q9D638 99 aa6.53□□□□□ -1.36
Clk1-201ENSMUST00000034868 Krtap3-3Q9D7P0 99 aa6.53□□□□□ -1.36
Clk1-201ENSMUST00000034868 Kctd17E0CYQ0 296 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Gm14548E9Q1Z6 680 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Gm21319F6YNI8 144 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Usp35M0QWN7 1009 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 BhmtO35490 407 aaKnown RBP6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Epha4Q03137 986 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Kmt5aQ2YDW7 349 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 SfswapQ3USH5 945 aaKnown RBP6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Prdm6Q3UZD5 596 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Fbxl21Q8BFZ4 434 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Galnt12Q8BGT9 576 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Mterf2Q8BKY8 385 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Inpp5fQ8CDA1 1132 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Mrpl58Q8R035 206 aa6.52□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms