RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Rfx1P48377 963 aa28,07■■■□□ 2,08
Cln6-201ENSMUST00000034776 Mrps27Q8BK72 415 aaKnown RBP28,07■■■□□ 2,08
Cln6-201ENSMUST00000034776 Taf5lQ91WQ5 589 aa28,07■■■□□ 2,08
Cln6-201ENSMUST00000034776 Sik1Q60670 779 aa28,07■■■□□ 2,08
Cln6-201ENSMUST00000034776 Hsp90b1P08113 802 aaKnown RBP28,06■■■□□ 2,08
Cln6-201ENSMUST00000034776 Gnat3Q3V3I2 354 aa28,06■■■□□ 2,08
Cln6-201ENSMUST00000034776 GpkowQ56A08 488 aa28,06■■■□□ 2,08
Cln6-201ENSMUST00000034776 Qtrt2B8ZXI1 415 aa28,06■■■□□ 2,08
Cln6-201ENSMUST00000034776 AK157302I3ITR1 129 aa28,06■■■□□ 2,08
Cln6-201ENSMUST00000034776 Smg7Q5RJH6 1138 aaKnown RBP28,06■■■□□ 2,08
Cln6-201ENSMUST00000034776 Isca1Q9D924 129 aa28,06■■■□□ 2,08
Cln6-201ENSMUST00000034776 Adora1Q60612 326 aa28,05■■■□□ 2,08
Cln6-201ENSMUST00000034776 Kat6bQ8BRB7 1872 aa28,05■■■□□ 2,08
Cln6-201ENSMUST00000034776 Zkscan16A2ALW2 728 aa28,04■■■□□ 2,08
Cln6-201ENSMUST00000034776 Ginm1Q91WR6 327 aa28,04■■■□□ 2,08
Cln6-201ENSMUST00000034776 Antxr1Q9CZ52 562 aa28,04■■■□□ 2,08
Cln6-201ENSMUST00000034776 Ets1P27577 440 aa28,04■■■□□ 2,08
Cln6-201ENSMUST00000034776 Tmem87bQ8BKU8 555 aa28,04■■■□□ 2,08
Cln6-201ENSMUST00000034776 Edc3Q8K2D3 508 aaKnown RBP28,04■■■□□ 2,08
Cln6-201ENSMUST00000034776 Hdac6Q9Z2V5 1149 aa28,04■■■□□ 2,08
Cln6-201ENSMUST00000034776 Sf3a1Q8K4Z5 791 aaKnown RBP28,03■■■□□ 2,08
Cln6-201ENSMUST00000034776 Pdlim2Q8R1G6 349 aa28,03■■■□□ 2,08
Cln6-201ENSMUST00000034776 Mst1rQ62190 1378 aa28,02■■■□□ 2,08
Cln6-201ENSMUST00000034776 Clcn1Q64347 994 aa28,02■■■□□ 2,08
Cln6-201ENSMUST00000034776 AbraQ8BUZ1 375 aa28,02■■■□□ 2,08
Cln6-201ENSMUST00000034776 Brf1Q8CFK2 676 aa28,01■■■□□ 2,08
Cln6-201ENSMUST00000034776 Bcl11bQ99PV8 884 aa28,01■■■□□ 2,08
Cln6-201ENSMUST00000034776 Ehd4Q9EQP2 541 aa28,01■■■□□ 2,08
Cln6-201ENSMUST00000034776 Ltb4r2Q9JJL9 360 aa28,01■■■□□ 2,08
Cln6-201ENSMUST00000034776 Nav1Q8CH77 1875 aa28,01■■■□□ 2,08
Cln6-201ENSMUST00000034776 Sos2Q02384 1333 aa28,01■■■□□ 2,07
Cln6-201ENSMUST00000034776 Exoc5Q3TPX4 708 aa28■■■□□ 2,07
Cln6-201ENSMUST00000034776 Cwc25Q9DBF7 416 aa28■■■□□ 2,07
Cln6-201ENSMUST00000034776 Cyp27a1Q9DBG1 533 aa28■■■□□ 2,07
Cln6-201ENSMUST00000034776 Stard3nlQ9DCI3 235 aa28■■■□□ 2,07
Cln6-201ENSMUST00000034776 Mrc1Q61830 1456 aa28■■■□□ 2,07
Cln6-201ENSMUST00000034776 Lrp6O88572 1613 aa28■■■□□ 2,07
Cln6-201ENSMUST00000034776 Stk3Q9JI10 497 aa28■■■□□ 2,07
Cln6-201ENSMUST00000034776 Pmfbp1Q9WVQ0 1022 aa28■■■□□ 2,07
Cln6-201ENSMUST00000034776 Sipa1l3G3X9J0 1776 aa27,99■■■□□ 2,07
Cln6-201ENSMUST00000034776 Tom1O88746 492 aa27,99■■■□□ 2,07
Cln6-201ENSMUST00000034776 Anapc15P60007 132 aa27,98■■■□□ 2,07
Cln6-201ENSMUST00000034776 Pde3bQ61409 1100 aa27,98■■■□□ 2,07
Cln6-201ENSMUST00000034776 Gigyf1Q99MR1 1044 aaKnown RBP27,98■■■□□ 2,07
Cln6-201ENSMUST00000034776 Bag3Q9JLV1 577 aaKnown RBP27,98■■■□□ 2,07
Cln6-201ENSMUST00000034776 Rsph3aQ3UFY4 516 aa27,97■■■□□ 2,07
Cln6-201ENSMUST00000034776 Jarid2Q62315 1234 aa27,97■■■□□ 2,07
Cln6-201ENSMUST00000034776 Slc26a8Q8R0C3 999 aa27,97■■■□□ 2,07
Cln6-201ENSMUST00000034776 Mast2Q60592 1734 aa27,97■■■□□ 2,07
Cln6-201ENSMUST00000034776 MccE9PWI3 1003 aa27,97■■■□□ 2,07
Cln6-201ENSMUST00000034776 Dcaf5Q80T85 946 aa27,97■■■□□ 2,07
Cln6-201ENSMUST00000034776 Fer1l6E0CZ42 1862 aa27,96■■■□□ 2,07
Cln6-201ENSMUST00000034776 Myd88P22366 296 aa27,96■■■□□ 2,07
Cln6-201ENSMUST00000034776 EspnlQ3UYR4 1005 aa27,96■■■□□ 2,07
Cln6-201ENSMUST00000034776 Ankrd23Q812A3 306 aa27,96■■■□□ 2,07
Cln6-201ENSMUST00000034776 DaxxO35613 739 aa27,95■■■□□ 2,07
Cln6-201ENSMUST00000034776 Ccdc129Q14B48 1034 aa27,95■■■□□ 2,07
Cln6-201ENSMUST00000034776 Stk11ipQ3TAA7 1072 aa27,95■■■□□ 2,07
Cln6-201ENSMUST00000034776 4930504O13RikQ8C5Z9 145 aa27,95■■■□□ 2,07
Cln6-201ENSMUST00000034776 Tbc1d4Q8BYJ6 1307 aa27,95■■■□□ 2,06
Cln6-201ENSMUST00000034776 Ms4a2P20490 235 aa27,95■■■□□ 2,06
Cln6-201ENSMUST00000034776 LlphQ9D945 130 aaKnown RBP27,94■■■□□ 2,06
Cln6-201ENSMUST00000034776 Tnrc6cQ3UHC0 1690 aaKnown RBP27,94■■■□□ 2,06
Cln6-201ENSMUST00000034776 Pm20d1Q8C165 503 aa27,94■■■□□ 2,06
Cln6-201ENSMUST00000034776 Q8C5K5 320 aa27,94■■■□□ 2,06
Cln6-201ENSMUST00000034776 Brpf1B2RRD7 1212 aa27,93■■■□□ 2,06
Cln6-201ENSMUST00000034776 Zbtb45Q52KG4 520 aa27,92■■■□□ 2,06
Cln6-201ENSMUST00000034776 Fam213aQ9CYH2 218 aa27,92■■■□□ 2,06
Cln6-201ENSMUST00000034776 Prl3d3A0A0M6L0J6 224 aa27,92■■■□□ 2,06
Cln6-201ENSMUST00000034776 Ppfia1B2RXQ2 1266 aa27,92■■■□□ 2,06
Cln6-201ENSMUST00000034776 Casq1O09165 405 aa27,92■■■□□ 2,06
Cln6-201ENSMUST00000034776 Gnl3lQ6PGG6 577 aaKnown RBP27,92■■■□□ 2,06
Cln6-201ENSMUST00000034776 Ankib1Q6ZPS6 1085 aa27,91■■■□□ 2,06
Cln6-201ENSMUST00000034776 Jmjd4Q8BFT6 427 aa27,91■■■□□ 2,06
Cln6-201ENSMUST00000034776 Rad50P70388 1312 aa27,91■■■□□ 2,06
Cln6-201ENSMUST00000034776 Dis3l2Q8CI75 870 aaKnown RBP27,91■■■□□ 2,06
Cln6-201ENSMUST00000034776 Pde4dQ01063 747 aa27,9■■■□□ 2,06
Cln6-201ENSMUST00000034776 Dhx38Q80X98 1228 aa27,9■■■□□ 2,06
Cln6-201ENSMUST00000034776 AtrnQ9WU60 1428 aa27,89■■■□□ 2,06
Cln6-201ENSMUST00000034776 Nlrp1aQ2LKU9 1182 aa27,89■■■□□ 2,06
Cln6-201ENSMUST00000034776 Jakmip1Q8BVL9 626 aa27,89■■■□□ 2,06
Cln6-201ENSMUST00000034776 Tshz3Q8CGV9 1081 aa27,89■■■□□ 2,06
Cln6-201ENSMUST00000034776 AnlnQ8K298 1121 aaKnown RBP27,89■■■□□ 2,06
Cln6-201ENSMUST00000034776 Prl3d2F6R3P9 224 aa27,89■■■□□ 2,05
Cln6-201ENSMUST00000034776 Ddit3P35639 168 aa27,89■■■□□ 2,05
Cln6-201ENSMUST00000034776 Kndc1Q0KK55 1742 aa27,89■■■□□ 2,05
Cln6-201ENSMUST00000034776 DbnlQ62418 436 aa27,88■■■□□ 2,05
Cln6-201ENSMUST00000034776 Ppp4r3aQ6P2K6 820 aa27,88■■■□□ 2,05
Cln6-201ENSMUST00000034776 Smc4Q8CG47 1286 aa27,88■■■□□ 2,05
Cln6-201ENSMUST00000034776 Sult6b1P0CC03 303 aa27,88■■■□□ 2,05
Cln6-201ENSMUST00000034776 Vps33bP59016 617 aa27,88■■■□□ 2,05
Cln6-201ENSMUST00000034776 NexnQ7TPW1 607 aa27,88■■■□□ 2,05
Cln6-201ENSMUST00000034776 Dmrtc1Q9D9R7 182 aa27,88■■■□□ 2,05
Cln6-201ENSMUST00000034776 Mlh1Q9JK91 760 aa27,88■■■□□ 2,05
Cln6-201ENSMUST00000034776 Rhot2Q8JZN7 620 aa27,87■■■□□ 2,05
Cln6-201ENSMUST00000034776 Nip7Q9CXK8 180 aaKnown RBP27,87■■■□□ 2,05
Cln6-201ENSMUST00000034776 MetP16056 1379 aa27,87■■■□□ 2,05
Cln6-201ENSMUST00000034776 AppP12023 770 aa27,86■■■□□ 2,05
Cln6-201ENSMUST00000034776 Atg9aQ68FE2 551 aa27,86■■■□□ 2,05
Cln6-201ENSMUST00000034776 LratQ9JI60 231 aa27,86■■■□□ 2,05
Retrieved 100 of 22,080 RNA–protein pairs in 35,5 ms