RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 TxlnbQ8VBT1 685 aa9.52□□□□□ -0.89
Trub1-201ENSMUST00000026072 Klhl10Q9D5V2 608 aa9.52□□□□□ -0.89
Trub1-201ENSMUST00000026072 Trim55G3X8Y1 545 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Gm42641I6L9G2 585 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Nol11Q8BJW5 723 aaKnown RBP9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 AtripQ8BMG1 785 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Gps2Q921N8 327 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Trim27Q62158 513 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Snx13Q6PHS6 957 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Baiap2l1Q9DBJ3 514 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 KdrP35918 1367 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Arhgef12Q8R4H2 1543 aaKnown RBP9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Pik3r4Q8VD65 1358 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Kcnj4P52189 445 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Tax1bp1Q3UKC1 814 aaKnown RBP9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Vps18Q8R307 973 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Q9D5Q8 446 aa9.51□□□□□ -0.89
Trub1-201ENSMUST00000026072 Prim1P20664 417 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Pa2g4P50580 394 aaKnown RBP9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Gnat3Q3V3I2 354 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Jakmip3Q5DTN8 844 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Cyp7a1Q64505 503 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Maats1Q8BRC6 783 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Lman1Q9D0F3 517 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Knop1Q9Z2Q2 478 aaKnown RBP9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Ppfia1B2RXQ2 1266 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Dnm1P39053 867 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Ube2hP62257 183 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Ifit1bl2Q3U687 466 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Erbb3Q61526 1339 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Fbf1A2A870 1173 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Stat1P42225 749 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Homer1Q9Z2Y3 366 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Rbbp8nlA2ABX0 614 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Rad23bP54728 416 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Lmbr1lQ9D1E5 489 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 Echdc1Q9D9V3 322 aa9.5□□□□□ -0.89
Trub1-201ENSMUST00000026072 CebpzP53569 1052 aaKnown RBP9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Slc14a2Q8R4T9 930 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Nip7Q9CXK8 180 aaKnown RBP9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 2310002L09RikQ9D7L5 217 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 TimelessQ9R1X4 1197 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Abcc1O35379 1528 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Rbm8a2A0A0N4SUH6 174 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 AU022751B1B0V2 589 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Gadd45bP22339 160 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Tbc1d32Q3URV1 1296 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Lrrfip1Q3UZ39 729 aaKnown RBP9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Exoc8Q6PGF7 716 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Sass6Q80UK7 654 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 DymQ8CHY3 669 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Rbm8aQ9CWZ3 174 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 LlphQ9D945 130 aaKnown RBP9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Metap2O08663 478 aaKnown RBP9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Gng11P61953 73 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Ankle2Q6P1H6 964 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Rnf41Q8BH75 317 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Tmem87bQ8BKU8 555 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Ripk4Q9ERK0 786 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Peg3Q3URU2 1571 aa9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 Cpsf1Q9EPU4 1441 aaKnown RBP9.49□□□□□ -0.89
Trub1-201ENSMUST00000026072 U2af1l4Q8BGJ9 220 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Ano2Q8CFW1 1002 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Mrps25Q9D125 171 aaKnown RBP9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Cwc25Q9DBF7 416 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Krt25Q8VCW2 446 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Tex19.1Q99MV2 351 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 RarsQ9D0I9 660 aaKnown RBP9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Pik3ap1Q9EQ32 811 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 ParvgQ9ERD8 331 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Tmem94Q7TSH8 1360 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Pdia3P27773 505 aaKnown RBP9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Cnga2Q62398 664 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 TxlnaQ6PAM1 554 aaKnown RBP9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Tacc1Q6Y685 774 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Lmod1Q8BVA4 595 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Chd1lQ9CXF7 900 aa9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Mrpl44Q9CY73 333 aaKnown RBP9.48□□□□□ -0.89
Trub1-201ENSMUST00000026072 Dzip1Q8BMD2 852 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Farp2Q91VS8 1065 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Bloc1s2Q9CWG9 143 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Igbp1bQ9QZ29 343 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 PtprgQ05909 1442 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Nfxl1E9Q8I7 918 aaKnown RBP9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Atp2b1G5E829 1220 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Stx1aO35526 288 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Rnf216P58283 853 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Exoc5Q3TPX4 708 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Tbc1d2bQ3U0J8 965 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Ddx10Q80Y44 875 aaKnown RBP9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Nap1l5Q9JJF0 156 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Zmym4A2A791 1549 aaKnown RBP9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Cfap73J3QPZ5 306 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Api5O35841 504 aaKnown RBP9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Paxbp1P58501 919 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Triml1Q8BVP1 470 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Snw1Q9CSN1 536 aaKnown RBP9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 AlkP97793 1621 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Usp25P57080 1055 aa9.47□□□□□ -0.89
Trub1-201ENSMUST00000026072 Wdhd1P59328 1117 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms