RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 TxlnaQ6PAM1 554 aaKnown RBP16.27■□□□□ 0.2
Col1a1-201ENSMUST00000001547 Otud6bQ8K2H2 294 aa16.27■□□□□ 0.2
Col1a1-201ENSMUST00000001547 Brms1Q99N20 246 aa16.27■□□□□ 0.2
Col1a1-201ENSMUST00000001547 Lmbr1lQ9D1E5 489 aa16.27■□□□□ 0.2
Col1a1-201ENSMUST00000001547 Cdk13Q69ZA1 1511 aaKnown RBP16.27■□□□□ 0.2
Col1a1-201ENSMUST00000001547 Tax1bp1Q3UKC1 814 aaKnown RBP16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Ccdc158Q8CDI6 1109 aa16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Tmc2Q8R4P4 888 aa16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Amotl1Q9D4H4 968 aa16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Rcan3Q9JKK0 239 aa16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Igbp1bQ9QZ29 343 aa16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Pola1P33609 1465 aa16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 GckrQ91X44 587 aa16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 MicalclQ9D5U9 680 aa16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 LlphQ9D945 130 aaKnown RBP16.27■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Arhgef40Q3UPH7 1517 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 LyarQ08288 388 aaKnown RBP16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 NsmfQ99NF2 532 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Dydc1Q9D9T0 175 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 PalldQ9ET54 1408 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Atp8b2P98199 1209 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Hand2Q61039 217 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Luzp1Q8R4U7 1068 aaKnown RBP16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Plekho1Q9JIY0 408 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Adgrl2Q8JZZ7 1487 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Bloc1s2Q9CWG9 143 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Ppp1r21Q3TDD9 780 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Spata24Q6P926 205 aa16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Mrpl44Q9CY73 333 aaKnown RBP16.26■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Astn2Q80Z10 1352 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Znf518aB2RRF6 1478 aaKnown RBP16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Igf2bp2Q5SF07 592 aaKnown RBP16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Abcc2Q8VI47 1543 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Cers3Q1A3B0 383 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Lrrfip2Q91WK0 415 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Homer1Q9Z2Y3 366 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Cavin2Q63918 418 aaKnown RBP16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Krt25Q8VCW2 446 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Izumo3A6PWV3 263 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Znf653Q6YND2 615 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 ParvgQ9ERD8 331 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Dennd4bQ3U1Y4 1499 aa16.25■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Tspyl3Q3UYP3 334 aa16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Ddx46Q569Z5 1032 aaKnown RBP16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Ppip5k1A2ARP1 1436 aa16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Map2k1P31938 393 aa16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Stat1P42225 749 aa16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Trim25Q61510 634 aaKnown RBP16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Tmem266Q8BZB3 538 aa16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Prrc2bQ7TPM1 1486 aaKnown RBP16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Zbtb21E9Q444 1094 aa16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Dnajc10Q9DC23 793 aa16.24■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Mybbp1aQ7TPV4 1344 aaKnown RBP16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Txndc16Q7TN22 820 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Slc14a2Q8R4T9 930 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Asxl2Q8BZ32 1370 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Rbbp8nlA2ABX0 614 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Gm42641I6L9G2 585 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Pdia4P08003 638 aaKnown RBP16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Grm8P47743 908 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 AtripQ8BMG1 785 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Vamp4O70480 141 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Pde1cQ64338 706 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 CenppQ9CZ92 286 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Kcnn1Q9EQR3 537 aa16.23■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Lrrc7Q80TE7 1490 aa16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Brd1E9PZ26 1189 aaKnown RBP16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Pet2A2AHY8 747 aa16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Metap2O08663 478 aaKnown RBP16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Cdan1Q8CC12 1239 aa16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 PtprgQ05909 1442 aa16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Hvcn1Q3U2S8 269 aa16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Ampd3O08739 766 aa16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Ccnl1Q52KE7 532 aaKnown RBP16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Tmx4Q8C0L0 335 aa16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Knop1Q9Z2Q2 478 aaKnown RBP16.22■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Zc3h12cQ5DTV4 884 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 IncenpQ9WU62 880 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Pdia3P27773 505 aaKnown RBP16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Ube2hP62257 183 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Gli2Q0VGT2 1544 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Cbx1P83917 185 aaKnown RBP16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Cep120Q7TSG1 988 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Aldh8a1Q8BH00 487 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Smarcc1P97496 1104 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Tacc1Q6Y685 774 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Znf131Q8K3J5 619 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Zbtb3Q91X45 518 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Lmtk2Q3TYD6 1471 aa16.21■□□□□ 0.19
Col1a1-201ENSMUST00000001547 Nap1l2P51860 460 aa16.21■□□□□ 0.18
Col1a1-201ENSMUST00000001547 Ppfia3P60469 1194 aa16.21■□□□□ 0.18
Col1a1-201ENSMUST00000001547 Stx1aO35526 288 aa16.2■□□□□ 0.18
Col1a1-201ENSMUST00000001547 Tsg101Q61187 391 aa16.2■□□□□ 0.18
Col1a1-201ENSMUST00000001547 Liat1Q810M6 228 aa16.2■□□□□ 0.18
Col1a1-201ENSMUST00000001547 Api5O35841 504 aaKnown RBP16.2■□□□□ 0.18
Col1a1-201ENSMUST00000001547 Mcmdc2E9Q956 681 aa16.2■□□□□ 0.18
Col1a1-201ENSMUST00000001547 ArsiQ32KI9 573 aa16.2■□□□□ 0.18
Col1a1-201ENSMUST00000001547 4931400O07RikQ9D4M5 137 aa16.2■□□□□ 0.18
Col1a1-201ENSMUST00000001547 Rbm8a2A0A0N4SUH6 174 aa16.2■□□□□ 0.18
Col1a1-201ENSMUST00000001547 Rbm8aQ9CWZ3 174 aa16.2■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms