RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 BCHEP06276 602 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 STARD6P59095 220 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 CSNK2BP67870 215 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 BNIP3Q12983 259 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 DUSP7Q16829 419 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 PRRT3Q5FWE3 981 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 C6orf120Q7Z4R8 191 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 APH1BQ8WW43 257 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 TANKQ92844 425 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 TEFMQ96QE5 360 aaKnown RBP14.28□□□□□ -0.12
TRIM3-215ENST00000639856 RHNO1Q9BSD3 238 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 PLGRKTQ9HBL7 147 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 GPR27Q9NS67 375 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 ACSS1Q9NUB1 689 aaPredicted RBP14.28□□□□□ -0.12
TRIM3-215ENST00000639856 ACER3Q9NUN7 267 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 TAS2R7Q9NYW3 318 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 FAM32AQ9Y421 112 aaKnown RBP14.28□□□□□ -0.12
TRIM3-215ENST00000639856 ABCA7Q8IZY2 2146 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 NINQ8N4C6 2090 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 C5orf58C9J3I9 102 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 RGS10O43665 173 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 FOXD2O60548 495 aaPredicted RBP14.27□□□□□ -0.12
TRIM3-215ENST00000639856 B4GALT2O60909 372 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 RECKO95980 971 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 RHCEP18577 417 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 GGT2P36268 569 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 SSR2P43308 183 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 LIMS1P48059 325 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 MLC1Q15049 377 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 TMEM35AQ53FP2 167 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 ARHGAP22Q7Z5H3 698 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF605Q86T29 641 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 EGFL6Q8IUX8 553 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 CROCCP3Q8IVE0 287 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 SVOPQ8N4V2 548 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 PSMA8Q8TAA3 256 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 GPBAR1Q8TDU6 330 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 C17orf62Q9BQA9 187 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 SRMSQ9H3Y6 488 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 OR6C2Q9NZP2 312 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 WNT16Q9UBV4 365 aa14.27□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF217O75362 1048 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 GADD45GO95257 159 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 MT-ND2P03891 347 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 IFNW1P05000 195 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 TFPTP0C1Z6 253 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 DRD2P14416 443 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 NDUFS1P28331 727 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 GRK3P35626 688 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 MASP1P48740 699 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 MVKQ03426 396 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 KCNC4Q03721 635 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 C1orf61Q13536 156 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 GPR18Q14330 331 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 SPDYE7PQ495Y7 208 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 Q6ZPB1 254 aaPredicted RBP14.27□□□□□ -0.13
TRIM3-215ENST00000639856 PRSS48Q7RTY5 328 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 TRIM73Q86UV7 250 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 DEFB123Q8N688 67 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 IPCEF1Q8WWN9 437 aaPredicted RBP14.27□□□□□ -0.13
TRIM3-215ENST00000639856 TMEM19Q96HH6 336 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 SIGLEC11Q96RL6 698 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 NIPSNAP1Q9BPW8 284 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 PSD2Q9BQI7 771 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 KLHL31Q9H511 634 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 EHD3Q9NZN3 535 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 RNF6Q9Y252 685 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 PCDHGA2Q9Y5H1 932 aa14.27□□□□□ -0.13
TRIM3-215ENST00000639856 C4orf51C9J302 202 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 TOR1BO14657 336 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 KDM1AO60341 852 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 BCAS1O75363 584 aaPredicted RBP14.26□□□□□ -0.13
TRIM3-215ENST00000639856 MAP2K4P45985 399 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 CCT3P49368 545 aaKnown RBP14.26□□□□□ -0.13
TRIM3-215ENST00000639856 ZP2Q05996 745 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 PUM1Q14671 1186 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRIM3-215ENST00000639856 ZIC1Q15915 447 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 RPS26P11Q5JNZ5 115 aaPredicted RBP14.26□□□□□ -0.13
TRIM3-215ENST00000639856 SYT6Q5T7P8 510 aaPredicted RBP14.26□□□□□ -0.13
TRIM3-215ENST00000639856 NDUFAF5Q5TEU4 345 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 ZNF793Q6ZN11 406 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 P3H2Q8IVL5 708 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 APOBEC4Q8WW27 367 aaKnown RBP14.26□□□□□ -0.13
TRIM3-215ENST00000639856 RAB8BQ92930 207 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 UCN3Q969E3 161 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 ZNF556Q9HAH1 456 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 HCN4Q9Y3Q4 1203 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 SNX11Q9Y5W9 270 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 SDK1Q7Z5N4 2213 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 HMGN4O00479 90 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 PCDH17O14917 1159 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 SH3BP5O60239 455 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 MAN1A2O60476 641 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 MFN2O95140 757 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 VIPP01282 170 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 MAOBP27338 520 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 CMPK1P30085 196 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 ABATP80404 500 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 AQP6Q13520 282 aa14.26□□□□□ -0.13
TRIM3-215ENST00000639856 CTF1Q16619 201 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 263.4 ms