RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 NFATC4Q14934 902 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ZIC1Q15915 447 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ZNF630Q2M218 657 aaPredicted RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 CYP27C1Q4G0S4 372 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 WASH2PQ6VEQ5 465 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 CCDC80Q76M96 950 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 RD3Q7Z3Z2 195 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 GPR141Q7Z602 305 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ZC3H7AQ8IWR0 971 aaKnown RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 TMEM145Q8NBT3 493 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 OR5P2Q8WZ92 322 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 MPP4Q96JB8 637 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ADNPQ9H2P0 1102 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 POLR1BQ9H9Y6 1135 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 TMEM184CQ9NVA4 438 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 DDX18Q9NVP1 670 aaKnown RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ADAM29Q9UKF5 820 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ORC6Q9Y5N6 252 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 BCKDKO14874 412 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 PRKRAO75569 313 aaKnown RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 HOXC4P09017 264 aaPredicted RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 RRM2P31350 389 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 SSR2P43308 183 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 TPD52P55327 224 aaPredicted RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 NXPH1P58417 271 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 C6orf141Q5SZD1 244 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 KIAA1614Q5VZ46 1190 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 SAXO2Q658L1 398 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 HORMAD2Q8N7B1 307 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 HDAC2Q92769 488 aaKnown RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 NEURL3Q96EH8 262 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 NRBF2Q96F24 287 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 NLNQ9BYT8 704 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 RIBC2Q9H4K1 309 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 KIR3DX1Q9H7L2 352 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 LIN28AQ9H9Z2 209 aaKnown RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 NINQ8N4C6 2090 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 FAM221BA6H8Z2 402 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 C9P02748 559 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 EEF1B2P24534 225 aaKnown RBP13.09□□□□□ -0.31
ATRIP-208ENST00000639561 CLK3P49761 638 aaKnown RBP13.09□□□□□ -0.31
ATRIP-208ENST00000639561 DSTNP60981 165 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 IL1RL1Q01638 556 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 RAB39AQ14964 217 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 ADPRMQ3LIE5 342 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 CRB2Q5IJ48 1285 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 RBM48Q5RL73 367 aaKnown RBP13.09□□□□□ -0.31
ATRIP-208ENST00000639561 NDUFAF5Q5TEU4 345 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 FAHD1Q6P587 224 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 TNFAIP8L2Q6P589 184 aaPredicted RBP13.09□□□□□ -0.31
ATRIP-208ENST00000639561 CEACAM20Q6UY09 585 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 DENND6BQ8NEG7 585 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 TTLQ8NG68 377 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 ZNF764Q96H86 408 aaPredicted RBP13.09□□□□□ -0.31
ATRIP-208ENST00000639561 EPYCQ99645 322 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 TMEM168Q9H0V1 697 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 NEUROD4Q9HD90 331 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 ZNF624Q9P2J8 865 aaPredicted RBP13.09□□□□□ -0.31
ATRIP-208ENST00000639561 KLK13Q9UKR3 277 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 CDC14AQ9UNH5 594 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 CABIN1Q9Y6J0 2220 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 TNFSF14O43557 240 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 JRKO75564 520 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 HTR1AP08908 422 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 ABATP80404 500 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 NEDD8Q15843 81 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 SMYD1Q8NB12 490 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 OR4E2Q8NGC2 313 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 FAM174AQ8TBP5 190 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 FBLIM1Q8WUP2 373 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 MS4A6EQ96DS6 147 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 WDR92Q96MX6 357 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 RAD21L1Q9H4I0 556 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 RUBCNLQ9H714 662 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 FTSJ1Q9UET6 329 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 ZNF451Q9Y4E5 1061 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 TESMINQ9Y4I5 508 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 LYVE1Q9Y5Y7 322 aa13.09□□□□□ -0.31
ATRIP-208ENST00000639561 MAP1BP46821 2468 aaKnown RBP13.08□□□□□ -0.31
ATRIP-208ENST00000639561 C1QTNF9BB2RNN3 333 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 ERI3O43414 337 aaKnown RBP13.08□□□□□ -0.32
ATRIP-208ENST00000639561 PRAMEF10O60809 474 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 CPNE6O95741 557 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 RECKO95980 971 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 CHRM5P08912 532 aaPredicted RBP13.08□□□□□ -0.32
ATRIP-208ENST00000639561 C1QTNF9P0C862 333 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 HNRNPA2B1P22626 353 aaKnown RBP13.08□□□□□ -0.32
ATRIP-208ENST00000639561 AKT2P31751 481 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 RYKP34925 604 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 GRK3P35626 688 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 RXRGP48443 463 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 ESRRGP62508 458 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 ELOAQ14241 798 aaKnown RBP13.08□□□□□ -0.32
ATRIP-208ENST00000639561 TMEM35AQ53FP2 167 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 IFI44LQ53G44 452 aa13.08□□□□□ -0.32
ATRIP-208ENST00000639561 RPS26P11Q5JNZ5 115 aaPredicted RBP13.08□□□□□ -0.32
ATRIP-208ENST00000639561 XAF1Q6GPH4 301 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 841 ms