RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TARBP2Q15633 366 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 STEAP4Q687X5 459 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CYB5R4Q7L1T6 521 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 LRRTM4Q86VH4 590 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 UBQLNLQ8IYU4 475 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 FUKQ8N0W3 1084 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 COMMD1Q8N668 190 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 OXER1Q8TDS5 423 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 FOXRED1Q96CU9 486 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SLC35A5Q9BS91 424 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM59Q9BXS4 323 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 UTS2RQ9UKP6 389 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SLC6A14Q9UN76 642 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 NCKAP5O14513 1909 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 LACTBL1A8MY62 500 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 OR2T1O43869 369 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 GLCEO94923 617 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CHRNA4P43681 627 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 HOXA1P49639 335 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 MVKQ03426 396 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 PLA2G7Q13093 441 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ELOCQ15369 112 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SGCAQ16586 387 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SH3PXD2AQ5TCZ1 1133 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SLX4IPQ5VYV7 408 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SLC22A10Q63ZE4 541 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 KANK2Q63ZY3 851 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 REP15Q6BDI9 236 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 UGT2A3Q6UWM9 527 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CUZD1Q86UP6 607 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 DTD1Q8TEA8 209 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CMTM7Q96FZ5 175 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 C3orf30Q96M34 536 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 LENG8Q96PV6 779 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 KIAA1683Q9H0B3 1180 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 GALNT9Q9HCQ5 603 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 KCTD3Q9Y597 815 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ADGRL2O95490 1459 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 IRAK2O43187 625 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 PAPSS1O43252 624 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 NDST3O95803 873 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ANXA7P20073 488 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 KDELR1P24390 212 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SSTR1P30872 391 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CORO1AP31146 461 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 MAP2K4P45985 399 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ARG2P78540 354 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 DEFA6Q01524 100 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 EN1Q05925 392 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 PMS2P3Q13401 168 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 GK3PQ14409 553 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 UGT3A2Q3SY77 523 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SPATS1Q496A3 300 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 C22orf42Q6IC83 251 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SLC18B1Q6NT16 456 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 IL20RBQ6UXL0 311 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 NIPA1Q7RTP0 329 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SNX29P2Q8IUI4 249 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ZDHHC21Q8IVQ6 265 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 OR6T1Q8NGN1 323 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ANGPTL6Q8NI99 470 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 FUBP3Q96I24 572 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 DEFB126Q9BYW3 111 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM165Q9HC07 324 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 OSGEPQ9NPF4 335 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ADAP2Q9NPF8 381 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 IL36AQ9UHA7 158 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SSUH2Q9Y2M2 353 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CRB1P82279 1406 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 COL1A2P08123 1366 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 IQGAP3Q86VI3 1631 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 TIGD3Q6B0B8 471 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ADGRD1Q6QNK2 874 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 DBX2Q6ZNG2 339 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 BBS12Q6ZW61 710 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 METTL4Q8N3J2 472 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 GALNT15Q8N3T1 639 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 RELL2Q8NC24 303 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FBXL8Q96CD0 374 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ZBED3Q96IU2 234 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM43Q9BTV4 400 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FUCA2Q9BTY2 467 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TRMT61BQ9BVS5 477 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ERVK13-1Q9NX77 482 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 P4HTMQ9NXG6 502 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 E5RJQ4 531 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 J3QLW9 94 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 WNT9AO14904 365 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SYN3O14994 580 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CLIC3O95833 236 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FHP07954 510 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF19P17023 458 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PTGER3P43115 390 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ERVFC1-1P60608 527 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SLC18A2Q05940 514 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PPA1Q15181 289 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 NECTIN1Q15223 517 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 HMGN3Q15651 99 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 IQCJQ1A5X6 159 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 BTBD16Q32M84 506 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms