RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 DENND4AQ7Z401 1863 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNF749O43361 778 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 LRP3O75074 770 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 TNFSF15O95150 251 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 AHRP35869 848 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 DGKQP52824 942 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 MSANTD1Q6ZTZ1 278 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 MFSD9Q8NBP5 474 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 TSPAN14Q8NG11 270 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR2L5Q8NG80 312 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 PRTFDC1Q9NRG1 225 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 VAPAQ9P0L0 249 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 UTS2RQ9UKP6 389 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 LOC105369274A0A096LPK9 316 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 LOC102723532A0A0G2JNH3 316 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 B3GALT4O96024 378 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 MERTKQ12866 999 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 GPR141Q7Z602 305 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR4N5Q8IXE1 308 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR4N4Q8N0Y3 316 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 NATD1Q8N6N6 113 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 GTF2H4Q92759 462 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 TMEM9Q9P0T7 183 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 SYNDIG1LA6NDD5 238 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 D6RAR5 112 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 CST1P01037 141 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 C7P10643 843 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 PTPN6P29350 595 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 OTX2P32243 289 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 PIK3CBP42338 1070 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 GZMMP51124 257 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 CLDN8P56748 225 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 PHC1P78364 1004 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 ADARB1P78563 741 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNF763Q0D2J5 394 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 TOP3AQ13472 1001 aaPredicted RBP11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 ANKRD26P1Q6NSI1 321 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 MICU2Q8IYU8 434 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAM86B1Q8N7N1 296 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR10A6Q8NH74 314 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 DOK4Q8TEW6 326 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 APIPQ96GX9 242 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 DCBLD2Q96PD2 775 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 ADI1Q9BV57 179 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 CHID1Q9BWS9 393 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 SPRTNQ9H040 489 aaPredicted RBP11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 C11orf16Q9NQ32 467 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAM120CQ9NX05 1096 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 ASIC5Q9NY37 505 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 MKL2Q9ULH7 1088 aa11.79□□□□□ -0.52
SYNGAP1-207ENST00000628646 KCNE1BA0A087WTH5 132 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 PRAMEF4O60810 478 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 TIA1P31483 386 aaKnown RBP eCLIP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 REEP5Q00765 189 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 BNC1Q01954 994 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 PTGR1Q14914 329 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNHIT3Q15649 155 aaPredicted RBP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 PRAMEF9Q5VWM5 478 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 NIPAL1Q6NVV3 410 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 MIPOL1Q8TD10 442 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC47A1Q96FL8 570 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 CCDC115Q96NT0 180 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 CLK4Q9HAZ1 481 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNF304Q9HCX3 659 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ADAP2Q9NPF8 381 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 PADI2Q9Y2J8 665 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 CXCR6O00574 342 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 PLD2O14939 933 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 IL3P08700 152 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 FTH1P19P0C7X4 201 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ITIH1P19827 911 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 XCR1P46094 333 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 CDH15P55291 814 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 TUBA4AP68366 448 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 MAT1AQ00266 395 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 HIPK1Q86Z02 1210 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR4A15Q8NGL6 344 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 GAL3ST3Q96A11 431 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 DGAT2Q96PD7 388 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 EHD1Q9H4M9 534 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC6A20Q9NP91 592 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ENOPH1Q9UHY7 261 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 UNC80Q8N2C7 3258 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 EI24O14681 340 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 PDPK1O15530 556 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 LCMT2O60294 686 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 CSNK2A2P19784 350 aaPredicted RBP11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 MTPNP58546 118 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ERV3-1Q14264 604 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 KCTD21Q4G0X4 260 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ATAD3BQ5T9A4 648 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 OGFOD3Q6PK18 319 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 SVOPLQ8N434 492 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 ACOT4Q8N9L9 421 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 FBXL20Q96IG2 436 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 SH3GL3Q99963 347 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 CRB3Q9BUF7 120 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 C3orf14Q9HBI5 128 aa11.78□□□□□ -0.52
SYNGAP1-207ENST00000628646 MS4A12Q9NXJ0 267 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms