RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TSSK6Q9BXA6 273 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF304Q9HCX3 659 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 PTBP2Q9UKA9 531 aaKnown RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 PTRH2Q9Y3E5 179 aaKnown RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 A0A0G2JPF8 293 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 CXorf51AA0A1B0GTR3 108 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 A8MVJ9 347 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 HNRNPCL3B7ZW38 293 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 SOX1O00570 391 aaPredicted RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 HNRNPCL4P0DMR1 293 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 CKMT2P17540 419 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 S100GP29377 79 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 MNDAP41218 407 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 ETV4P43268 484 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 XCR1P46094 333 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 BTBD16Q32M84 506 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 C5orf22Q49AR2 442 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF551Q7Z340 670 aaPredicted RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 DIO2Q92813 273 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 UFD1Q92890 307 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 BMFQ96LC9 184 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 SEC61A2Q9H9S3 476 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 PDFQ9HBH1 243 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 ZBTB20Q9HC78 741 aaPredicted RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 MYNNQ9NPC7 610 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 HPF1Q9NWY4 346 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 INTS6Q9UL03 887 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF451Q9Y4E5 1061 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 SGK494L7N484 410 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 AHCYL1O43865 530 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 GABBR2O75899 941 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 PVRP15151 417 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 NDUFV2P19404 249 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 AQP4P55087 323 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 RPS3AP61247 264 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 PMS2P3Q13401 168 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 HENMT1Q5T8I9 393 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 TREML1Q86YW5 311 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 KLHL36Q8N4N3 616 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 MFSD9Q8NBP5 474 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 LYSMD1Q96S90 227 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 COQ7Q99807 217 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 SMOXQ9NWM0 555 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 PISDQ9UG56 409 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 BTNL2Q9UIR0 455 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 TMEM265A0A087WTH1 108 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 FAAHO00519 579 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 ACSL1P33121 698 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 RHAGQ02094 409 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 TPRG1LQ5T0D9 272 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC5A8Q8N695 610 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 C19orf47Q8N9M1 422 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 CLEC4MQ9H2X3 399 aaPredicted RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 C6orf106Q9H6K1 298 aaPredicted RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 DIABLOQ9NR28 239 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 NAALAD2Q9Y3Q0 740 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 RBM7Q9Y580 266 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 NOX1Q9Y5S8 564 aa8.98□□□□□ -0.97
CLTCL1-208ENST00000615606 IL33O95760 270 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 IGHEP01854 428 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 UGT2B7P16662 529 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 HK1P19367 917 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 CLCN2P51788 898 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 ROR2Q01974 943 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 DPTQ07507 201 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 TMEM225Q6GV28 225 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 OGFOD2Q6N063 350 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 FIGNL1Q6PIW4 674 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 HSDL2Q6YN16 418 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 GHDCQ8N2G8 530 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 FOXQ1Q9C009 403 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 MTHFD2LQ9H903 347 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 LTB4R2Q9NPC1 389 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 CENPMQ9NSP4 180 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 ASB6Q9NWX5 421 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC6A14Q9UN76 642 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 C17orf105B2RV13 164 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 SNPHO15079 494 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 RNF13O43567 381 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 DIRAS1O95057 198 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 RPLP0P05388 317 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 HSD11B1P28845 292 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 INHBCP55103 352 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 PTPRRQ15256 657 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 RPL13AP3Q6NVV1 102 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 CLECL1Q8IZS7 167 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 VWA5B2Q8N398 1253 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 PARP8Q8N3A8 854 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 S100ZQ8WXG8 99 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 PIP5K1AQ99755 562 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 NAA11Q9BSU3 229 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 SDR39U1Q9NRG7 319 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 MRPL39Q9NYK5 338 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 TNFRSF10DQ9UBN6 386 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 ACSL6Q9UKU0 697 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 C2orf92A0A1B0GVN3 265 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 EFCAB7A8K855 629 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF670-ZNF695F2Z2N8 137 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 HAT1O14929 419 aa8.97□□□□□ -0.97
CLTCL1-208ENST00000615606 CR2P20023 1033 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms