RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 PPWD1Q96BP3 646 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 WDYHV1Q96HA8 205 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 RILPQ96NA2 401 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 KRT12Q99456 494 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 SFXN3Q9BWM7 321 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 ERVK-6Q9BXR3 956 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 WWTR1Q9GZV5 400 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 RYDENQ9NUL5 291 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 GPRC5BQ9NZH0 403 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 C6orf203Q9P0P8 240 aaPredicted RBP15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 ERVK-19Q9WJR5 959 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 C15orf41Q9Y2V0 281 aa15.73■□□□□ 0.11
CSNK1E-215ENST00000612795 ANKRD33BA6NCL7 494 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 NCF1BA6NI72 391 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 NCF1CA8MVU1 366 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 CAPN14A8MX76 684 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 RTCAO00442 366 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 NCF1P14598 390 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 ATP5A1P25705 553 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 GCKP35557 465 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 SSR2P43308 183 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 IGLV3-21P80748 117 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 FOXF2Q12947 444 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 EIPR1Q53HC9 387 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 NHSL2Q5HYW2 709 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 WIPI1Q5MNZ9 446 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 BICRALQ6AI39 1079 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 PACS2Q86VP3 889 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 NKAPQ8N5F7 415 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 DOK4Q8TEW6 326 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 ABTB1Q969K4 478 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 MAGOHBQ96A72 148 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 RHBDF1Q96CC6 855 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 NTNG2Q96CW9 530 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 ZFP3Q96NJ6 502 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 TBCDQ9BTW9 1192 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 UBQLN3Q9H347 655 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 EHD1Q9H4M9 534 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 WWOXQ9NZC7 414 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 TESMINQ9Y4I5 508 aa15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 FBN1P35555 2871 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-215ENST00000612795 BANF1O75531 89 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 SNX4O95219 450 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 HIST1H1TP22492 207 aaPredicted RBP15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 DIO3P55073 304 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 EBPQ15125 230 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 TSNQ15631 228 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 AP5B1Q2VPB7 878 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 DGAT2L6Q6ZPD8 337 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 PPIL6Q8IXY8 311 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 SNX31Q8N9S9 440 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 BBOF1Q8ND07 529 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 ANKRD7Q92527 254 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 PTCD3Q96EY7 689 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 GNRHR2Q96P88 292 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 TM9SF2Q99805 663 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 PHACTR1Q9C0D0 580 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 RPF2Q9H7B2 306 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 DNAJC11Q9NVH1 559 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 TEX10Q9NXF1 929 aaPredicted RBP15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 CTNNAL1Q9UBT7 734 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 IKBKGQ9Y6K9 419 aa15.71■□□□□ 0.11
CSNK1E-215ENST00000612795 OR6C76A6NM76 312 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 H0Y3Z8 333 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 OR10H2O60403 315 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 ALOX15P16050 662 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 TMED10P49755 219 aaKnown RBP15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 FBXW4P57775 412 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 RPP38P78345 283 aaKnown RBP15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 BIKQ13323 160 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 ZNF267Q14586 743 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 ZNF460Q14592 562 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 PAGE2BQ5JRK9 111 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 TEDDM1Q5T9Z0 273 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 TMEM64Q6YI46 380 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 ZPLD1Q8TCW7 415 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 PIK3IP1Q96FE7 263 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 PELOQ9BRX2 385 aaKnown RBP15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 NAT9Q9BTE0 207 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 EFCAB11Q9BUY7 163 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 MS4A8Q9BY19 250 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 ACBD3Q9H3P7 528 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 PIGMQ9H3S5 423 aa15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 CNOT10Q9H9A5 744 aaKnown RBP15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 ZNF490Q9ULM2 529 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-215ENST00000612795 RNF212BA8MTL3 300 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 SH3BGRLO75368 114 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 CNOT4O95628 575 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 ACTL6AO96019 429 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 SLCO1A2P46721 670 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 SLC37A1P57057 533 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 LAPTM5Q13571 262 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 DOC2AQ14183 400 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 ACKR1Q16570 336 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 HIST2H2ACQ16777 129 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 SPRED3Q2MJR0 410 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 HLA-DQA1Q5Y7H0 255 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 HIST2H2AA3Q6FI13 130 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 CCDC137Q6PK04 289 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 UBE3DQ7Z6J8 389 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms