RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 OR5D16Q8NGK9 328 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 DPH7Q9BTV6 452 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 MROQ9BYG7 248 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 DPEP2Q9H4A9 486 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 FBXL12Q9NXK8 326 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 DNMT3BQ9UBC3 853 aaKnown RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 GTF2A1LQ9UNN4 478 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 CMAHPQ9Y471 501 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 OR10H1Q9Y4A9 318 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 CCL27Q9Y4X3 112 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 A8MV72 311 aaPredicted RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 FAM227AF5H4B4 570 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 PRSS23O95084 383 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 GASTP01350 101 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 PSMB5P28074 263 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 MMP12P39900 470 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ERVK-21P61565 698 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 KCNJ10P78508 379 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 TRAM2Q15035 370 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ZSWIM7Q19AV6 140 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 GTF2IRD2BQ6EKJ0 949 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 HSDL2Q6YN16 418 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 CXXC5Q7LFL8 322 aaKnown RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 GTF2IRD2Q86UP8 949 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 KLHL36Q8N4N3 616 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 COX18Q8N8Q8 333 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 BBS10Q8TAM1 723 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 GPR151Q8TDV0 419 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 VN1R3Q9BXE9 311 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 TMEM27Q9HBJ8 222 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 SLC35C2Q9NQQ7 365 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 LOC285556D6RIA3 1793 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 MIA3Q5JRA6 1907 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 A0A1W2PP55 124 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 OR2A25A4D2G3 310 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CTDSP2O14595 271 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 AKAP8O43823 692 aaKnown RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 HMGN1P05114 100 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ASGR2P07307 311 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SLC2A2P11168 524 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 PSKH1P11801 424 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CTSEP14091 401 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 JUNDP17535 347 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CELP19835 753 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ITGB7P26010 798 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 TGFBR1P36897 503 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 HNRNPA1L2Q32P51 320 aaKnown RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 RNASE12Q5GAN4 147 aaKnown RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 IDNKQ5T6J7 187 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 OR4C11Q6IEV9 310 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 LCTLQ6UWM7 567 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 TMEM107Q6UX40 140 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SLC36A4Q6YBV0 504 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ZFP41Q8N8Y5 198 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 WDR20Q8TBZ3 569 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 JPH3Q8WXH2 748 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 CLIP3Q96DZ5 547 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 RAD9AQ99638 391 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 DOK1Q99704 481 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 MCHR1Q99705 422 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 MACROD1Q9BQ69 325 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 IFT27Q9BW83 186 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CUEDC1Q9NWM3 386 aaPredicted RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 ING3Q9NXR8 418 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 TAS2R7Q9NYW3 318 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 TNFRSF10DQ9UBN6 386 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 BRCA1P38398 1863 aaKnown RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 SLC5A10A0PJK1 596 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 DAPL1A0PJW8 107 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 HNRNPA1P09651 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
LIG4-204ENST00000611712 CEBPBP17676 345 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ZFP36L2P47974 494 aaKnown RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 ZNF385BQ569K4 471 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ENPP7Q6UWV6 458 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 PDZD3Q86UT5 571 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 MEX3DQ86XN8 651 aaKnown RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 MRPL43Q8N983 215 aaKnown RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 FAM98AQ8NCA5 519 aaKnown RBP8.25□□□□□ -1.09
LIG4-204ENST00000611712 OR2L2Q8NH16 312 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 RAB7BQ96AH8 199 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 PHOX2BQ99453 314 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 C19orf43Q9BQ61 176 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CENPOQ9BU64 300 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 LMAN2LQ9H0V9 348 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 CXorf36Q9H7Y0 433 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SP140LQ9H930 580 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 DKK3Q9UBP4 350 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 GPR52Q9Y2T5 361 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 RWDD3Q9Y3V2 267 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 WDR45Q9Y484 360 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 TRBV4-1A0A0J9YWV2 114 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 RIIAD1A6NNX1 92 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 PTTG1O95997 202 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 IFNA16P05015 189 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 ERVFC1P60507 584 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SYPL1Q16563 259 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 TMEM44Q2T9K0 475 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 DESI1Q6ICB0 168 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 SLC46A3Q7Z3Q1 461 aa8.25□□□□□ -1.09
LIG4-204ENST00000611712 PARGQ86W56 976 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms