RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 SEC22BO75396 215 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 ITGA10O75578 1167 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 CRYABP02511 175 aaKnown RBP13.27□□□□□ -0.29
HDDC2-209ENST00000609477 CHRNGP07510 517 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 SSR4P51571 173 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 KCNC4Q03721 635 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 KIAA0040Q15053 153 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 OR1C1Q15619 314 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 UGT3A2Q3SY77 523 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 ZNF766Q5HY98 468 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 SH2D4BQ5SQS7 431 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 SCIMPQ6UWF3 145 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 FAM180AQ6UWF9 173 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 GALNT12Q8IXK2 581 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 DND1Q8IYX4 353 aaKnown RBP13.27□□□□□ -0.29
HDDC2-209ENST00000609477 CISD2Q8N5K1 135 aaKnown RBP13.27□□□□□ -0.29
HDDC2-209ENST00000609477 TMEM156Q8N614 296 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 SLC15A4Q8N697 577 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 OR7G1Q8NGA0 311 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.27□□□□□ -0.29
HDDC2-209ENST00000609477 C16orf78Q8WTQ4 265 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 TMEM125Q96AQ2 219 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 PPWD1Q96BP3 646 aaKnown RBP13.27□□□□□ -0.29
HDDC2-209ENST00000609477 ERP27Q96DN0 273 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 SCMH1Q96GD3 660 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 C5orf34Q96MH7 638 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 TMBIM4Q9HC24 238 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 TAS2R7Q9NYW3 318 aa13.27□□□□□ -0.29
HDDC2-209ENST00000609477 UBR5O95071 2799 aaPredicted RBP13.27□□□□□ -0.29
HDDC2-209ENST00000609477 TMEM200CA6NKL6 621 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 WASHC1A8K0Z3 465 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 NEURL1O76050 574 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 RASAL1O95294 804 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 IL3P08700 152 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 DDCP20711 480 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 SLC37A1P57057 533 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 OC90Q02509 493 aaPredicted RBP13.26□□□□□ -0.29
HDDC2-209ENST00000609477 BTKQ06187 659 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 FUT7Q11130 342 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 MAP4K2Q12851 820 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 CEBPEQ15744 281 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 COLEC12Q5KU26 742 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 AGBL2Q5U5Z8 902 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 NOXRED1Q6NXP6 359 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 RNF111Q6ZNA4 994 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 Q6ZSR9 355 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 ZCCHC23Q6ZST2 131 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 SLC29A4Q7RTT9 530 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 LRRC25Q8N386 305 aaPredicted RBP13.26□□□□□ -0.29
HDDC2-209ENST00000609477 BCORP1Q8N888 145 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 FAM98AQ8NCA5 519 aaKnown RBP13.26□□□□□ -0.29
HDDC2-209ENST00000609477 C17orf47Q8NEP4 570 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 TWIST2Q8WVJ9 160 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 FAR1Q8WVX9 515 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 TLCD1Q96CP7 247 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 KLHL29Q96CT2 875 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 ZNF764Q96H86 408 aaPredicted RBP13.26□□□□□ -0.29
HDDC2-209ENST00000609477 PPP3R2Q96LZ3 170 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 TRIM4Q9C037 500 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 VIPAS39Q9H9C1 493 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 LRTM1Q9HBL6 345 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 MYNNQ9NPC7 610 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 GIMAP4Q9NUV9 329 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 LUZP4Q9P127 313 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 UTS2RQ9UKP6 389 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 CFL2Q9Y281 166 aa13.26□□□□□ -0.29
HDDC2-209ENST00000609477 MYOCOSA0A1B0GUC4 107 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 LSM1O15116 133 aaKnown RBP13.25□□□□□ -0.29
HDDC2-209ENST00000609477 MAN1A2O60476 641 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 ERAL1O75616 437 aaKnown RBP13.25□□□□□ -0.29
HDDC2-209ENST00000609477 BCAS2O75934 225 aaPredicted RBP13.25□□□□□ -0.29
HDDC2-209ENST00000609477 SLITRK5O94991 958 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 HSPA4LO95757 839 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 SP1P08047 785 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 MPIP34949 423 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 ALDH9A1P49189 494 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 HK2P52789 917 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 ABCE1P61221 599 aaKnown RBP13.25□□□□□ -0.29
HDDC2-209ENST00000609477 MAGOHP61326 146 aaKnown RBP13.25□□□□□ -0.29
HDDC2-209ENST00000609477 ERVK-8P63133 956 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 MPP2Q14168 576 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 ZNF267Q14586 743 aaPredicted RBP13.25□□□□□ -0.29
HDDC2-209ENST00000609477 NR6A1Q15406 480 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 CHI3L2Q15782 390 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 IGFBP7Q16270 282 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 HHATQ5VTY9 493 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 SPINK14Q6IE38 97 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 SLC25A25Q6KCM7 469 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 OPN5Q6U736 354 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 DGAT2L6Q6ZPD8 337 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 HDXQ7Z353 690 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 DDIASQ8IXT1 998 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 RAB3IL1Q8TBN0 382 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 THAP3Q8WTV1 239 aaPredicted RBP13.25□□□□□ -0.29
HDDC2-209ENST00000609477 UCN3Q969E3 161 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 TP53INP1Q96A56 240 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 FCRL1Q96LA6 429 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 SGCZQ96LD1 299 aa13.25□□□□□ -0.29
HDDC2-209ENST00000609477 ZNF681Q96N22 645 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms