RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CDC14CA4D256 554 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 MYO1GB0I1T2 1018 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 MASP2O00187 686 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 HRKO00198 91 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 EFSO43281 561 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CCDC22O60826 627 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 DCTN3O75935 186 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 ATP1B1P05026 303 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 PGRP06401 933 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CYC1P08574 325 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CT62P0C5K7 136 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 SLC35E2P0CK97 266 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 COX6A1P12074 109 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CSNK2A2P19784 350 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 NT5EP21589 574 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 MMP11P24347 488 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 S100A3P33764 101 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 SOX18P35713 384 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 FRKP42685 505 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 KIR3DL1P43629 444 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 STT3AP46977 705 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CDK9P50750 372 aaKnown RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 PGDP52209 483 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 NCBP2P52298 156 aaKnown RBP eCLIP7.18□□□□□ -1.261e-9■□□□□ 10.8
MSH6-211ENST00000606499 WNT3P56703 355 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 KCNK10P57789 538 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 OR4D2P58180 307 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 MRPS35P82673 323 aaKnown RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 SRSF11Q05519 484 aaKnown RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 HSPB3Q12988 150 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 ATP1A4Q13733 1029 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 SERTAD2Q14140 314 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 PCOLCEQ15113 449 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 ELAVL1Q15717 326 aaKnown RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 CEBPEQ15744 281 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 DPY19L1Q2PZI1 675 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CPZQ66K79 652 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 PAPD4Q6PIY7 484 aaKnown RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 SLC2A7Q6PXP3 512 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 BLOC1S3Q6QNY0 202 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 KIRREL2Q6UWL6 708 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 DNAJC14Q6Y2X3 702 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 CPEB2Q7Z5Q1 589 aaKnown RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 SNX32Q86XE0 403 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 PROSER1Q86XN7 944 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 TREML1Q86YW5 311 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 SPACA3Q8IXA5 215 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CCDC116Q8IYX3 515 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 ST13P4Q8IZP2 240 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 POU5F2Q8N7G0 328 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 ANKS4BQ8N8V4 417 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 GLB1L3Q8NCI6 653 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 SIMC1Q8NDZ2 872 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 OR11G2Q8NGC1 345 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 OR8J2Q8NGG1 315 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 OR9A2Q8NGT5 310 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 ADAMTS17Q8TE56 1095 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 PTPMT1Q8WUK0 201 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 KAT2AQ92830 837 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 SPDL1Q96EA4 605 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 OR52E6Q96RD3 313 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CCNL2Q96S94 520 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 WDR77Q9BQA1 342 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 CCDC106Q9BWC9 280 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 BHLHE41Q9C0J9 482 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 GLIPR2Q9H4G4 154 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 ANKRA2Q9H9E1 313 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 ADAP2Q9NPF8 381 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 SLC52A3Q9NQ40 469 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 GIMAP4Q9NUV9 329 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 C19orf25Q9UFG5 118 aaPredicted RBP7.18□□□□□ -1.26
MSH6-211ENST00000606499 FBXL4Q9UKA2 621 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 MAPRE3Q9UPY8 281 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CAPN7Q9Y6W3 813 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 USP24Q9UPU5 2620 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 CROCCQ5TZA2 2017 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 KNTC1P50748 2209 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 PRRC2CQ9Y520 2896 aaKnown RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 A0A1W2PQ72 361 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 A0A1W2PRB8 838 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 CCDC154A6NI56 674 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 SAGE2PA6NJ88 616 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 C17orf105B2RV13 164 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 TAF4O00268 1085 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 NKX2-8O15522 239 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 RRP8O43159 456 aaKnown RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 SCN2BO60939 215 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 DDAH2O95865 285 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 C6orf47O95873 294 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 IGHEP01854 428 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 IL6P05231 212 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ABCB1P08183 1280 aaPredicted RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 CELA2AP08217 269 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 PCSK2P16519 638 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 DDX5P17844 614 aaKnown RBP7.17□□□□□ -1.26
MSH6-211ENST00000606499 TNNI3P19429 210 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 ITPKBP27987 946 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 MPIP34949 423 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 GPC1P35052 558 aa7.17□□□□□ -1.26
MSH6-211ENST00000606499 MC3RP41968 323 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms