RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CAPN12Q6ZSI9 719 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 SEM1Q6ZVN7 128 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 MAATS1Q7Z4T9 603 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 CREG2Q8IUH2 290 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 LACC1Q8IV20 430 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 TAGAPQ8N103 731 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 RELL2Q8NC24 303 aaPredicted RBP19.45■□□□□ 0.7
PNKP-212ENST00000599454 ZNF597Q96LX8 424 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 GAL3ST4Q96RP7 486 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 SH3GL2Q99962 352 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 DOHHQ9BU89 302 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 ERVK-6Q9BXR3 956 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 WWTR1Q9GZV5 400 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 OR51B5Q9H339 312 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 OPTCQ9UBM4 332 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 ZNF629Q9UEG4 869 aaPredicted RBP19.45■□□□□ 0.7
PNKP-212ENST00000599454 MTRF1LQ9UGC7 380 aaKnown RBP19.45■□□□□ 0.7
PNKP-212ENST00000599454 CNOT11Q9UKZ1 510 aaKnown RBP19.45■□□□□ 0.7
PNKP-212ENST00000599454 ERVK-19Q9WJR5 959 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 IKBKGQ9Y6K9 419 aa19.45■□□□□ 0.7
PNKP-212ENST00000599454 ABCA2Q9BZC7 2435 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 CAPN14A8MX76 684 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 CXorf49A8MYA2 514 aaPredicted RBP19.44■□□□□ 0.7
PNKP-212ENST00000599454 HRKO00198 91 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 SAP18O00422 153 aaKnown RBP19.44■□□□□ 0.7
PNKP-212ENST00000599454 TP53I11O14683 189 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 EIF3HO15372 352 aaKnown RBP eCLIP19.44■□□□□ 0.7
PNKP-212ENST00000599454 C1QAP02745 245 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 BMP5P22003 454 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 SSTR1P30872 391 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 CEACAM8P31997 349 aaPredicted RBP19.44■□□□□ 0.7
PNKP-212ENST00000599454 GALNSP34059 522 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 TIMP3P35625 211 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 CEBPEQ15744 281 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 ACSF3Q4G176 576 aaPredicted RBP19.44■□□□□ 0.7
PNKP-212ENST00000599454 TMEM198Q66K66 360 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 DGAT2L6Q6ZPD8 337 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 CAMKMTQ7Z624 323 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 HUS1BQ8NHY5 278 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 MBD6Q96DN6 1003 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 JSRP1Q96MG2 331 aaPredicted RBP19.44■□□□□ 0.7
PNKP-212ENST00000599454 LIME1Q9H400 295 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 ALG9Q9H6U8 611 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 NMRAL1Q9HBL8 299 aa19.44■□□□□ 0.7
PNKP-212ENST00000599454 HRNRQ86YZ3 2850 aaPredicted RBP19.44■□□□□ 0.7
PNKP-212ENST00000599454 C15orf38-AP3S2A0A0A6YYH1 394 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 PLPP1O14494 284 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 PROM1O43490 865 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 OR10H2O60403 315 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 FAM155BO75949 473 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 GPR75O95800 540 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 FOSL1P15407 271 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 EPB42P16452 691 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 GDF1P27539 372 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 RPL21P46778 160 aaKnown RBP19.43■□□□□ 0.7
PNKP-212ENST00000599454 HNRNPH2P55795 449 aaKnown RBP19.43■□□□□ 0.7
PNKP-212ENST00000599454 SLC37A1P57057 533 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 PHEXP78562 749 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 DUSP8Q13202 625 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 SNTB1Q13884 538 aaKnown RBP19.43■□□□□ 0.7
PNKP-212ENST00000599454 ZNF267Q14586 743 aaPredicted RBP19.43■□□□□ 0.7
PNKP-212ENST00000599454 DAZAP2Q15038 168 aaPredicted RBP19.43■□□□□ 0.7
PNKP-212ENST00000599454 EBPQ15125 230 aaKnown RBP19.43■□□□□ 0.7
PNKP-212ENST00000599454 C18orf63Q68DL7 685 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 ISCA2Q86U28 154 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 CDC20BQ86Y33 519 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 PM20D2Q8IYS1 436 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 RIT1Q92963 219 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 HSPBAP1Q96EW2 488 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 SORBS1Q9BX66 1292 aaKnown RBP19.43■□□□□ 0.7
PNKP-212ENST00000599454 DMRT3Q9NQL9 472 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 LYARQ9NX58 379 aaKnown RBP19.43■□□□□ 0.7
PNKP-212ENST00000599454 PLEKHA6Q9Y2H5 1048 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 SNX24Q9Y343 169 aa19.43■□□□□ 0.7
PNKP-212ENST00000599454 ZNF469Q96JG9 3925 aaPredicted RBP19.42■□□□□ 0.7
PNKP-212ENST00000599454 TCRBV9S1A1TA0A576 114 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 FAM159BA6NKW6 160 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 SUPT3HB4E1H0 165 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 KERAO60938 352 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 TRIM3O75382 744 aaPredicted RBP19.42■□□□□ 0.7
PNKP-212ENST00000599454 SUPT3HO75486 399 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 IL2RAP01589 272 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 GSTA2P09210 222 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 HOXB4P17483 251 aaPredicted RBP19.42■□□□□ 0.7
PNKP-212ENST00000599454 SPRP35270 261 aaPredicted RBP19.42■□□□□ 0.7
PNKP-212ENST00000599454 TRPC1P48995 793 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 CRYZQ08257 329 aaKnown RBP19.42■□□□□ 0.7
PNKP-212ENST00000599454 DDX39BQ13838 428 aaKnown RBP19.42■□□□□ 0.7
PNKP-212ENST00000599454 RPS6KA2Q15349 733 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 NAXEQ8NCW5 288 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 TNIP2Q8NFZ5 429 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 DIO2Q92813 273 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 TP53INP1Q96A56 240 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 ATOH8Q96SQ7 321 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 SECISBP2Q96T21 854 aaKnown RBP19.42■□□□□ 0.7
PNKP-212ENST00000599454 WDR41Q9HAD4 459 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 SNX15Q9NRS6 342 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 CBLCQ9ULV8 474 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 PCDHGA11Q9Y5H2 935 aa19.42■□□□□ 0.7
PNKP-212ENST00000599454 KIAA1549Q9HCM3 1950 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms