RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ACAT1P24752 427 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 OTX2P32243 289 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 CAPGP40121 348 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 ADARP55265 1226 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 EIF3EP60228 445 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 MRPS15P82914 257 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 GFPT1Q06210 699 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 HSPB3Q12988 150 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 GTDC1Q4AE62 458 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 CEP85LQ5SZL2 805 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 RNASEH2BQ5TBB1 312 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 C6orf163Q5TEZ5 329 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 PRAMEF20Q5VT98 475 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 RAET1GQ6H3X3 334 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 ERICH5Q6P6B1 374 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF790Q6PG37 636 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 MOXD1Q6UVY6 613 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 TMCO2Q7Z6W1 182 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 IQCHQ86VS3 1027 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 AMZ2Q86W34 360 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 ERO1BQ86YB8 467 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 CD302Q8IX05 232 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 TIGD4Q8IY51 512 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 BATF2Q8N1L9 274 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 ARHGAP24Q8N264 748 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 STEAP2Q8NFT2 490 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 OR10S1Q8NGN2 331 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 OR13J1Q8NGT2 312 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 CCDC107Q8WV48 283 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 HSD17B8Q92506 261 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 SYN2Q92777 582 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 LGALS12Q96DT0 336 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 NSMCE2Q96MF7 247 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 SFXN2Q96NB2 322 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 TTC25Q96NG3 672 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 SEPHS2Q99611 448 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 ZSCAN5AQ9BUG6 496 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 SPZ1Q9BXG8 430 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 ECT2Q9H8V3 914 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 AKIRIN1Q9H9L7 192 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 A4GALTQ9NPC4 353 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 CRNNQ9UBG3 495 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 TRIM10Q9UDY6 481 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 TRMT6Q9UJA5 497 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 DNPEPQ9ULA0 475 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 PLEKHA6Q9Y2H5 1048 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 C5orf42Q9H799 3197 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 CD163L1Q9NR16 1453 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 FASNP49327 2511 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 PCDH11XQ9BZA7 1347 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 PCDH11YQ9BZA8 1340 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 A0A087WZY1 265 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 IGLV9-49A0A0B4J1Y8 123 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 SERTM2A0A1B0GWG4 89 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 MAGEB16A2A368 324 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 TRIM49BA6NDI0 452 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 MFSD2BA6NFX1 497 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 K7ERQ8 282 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 TLX2O43763 284 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 PRKRAO75569 313 aaKnown RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 CTAG2O75638 210 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 TRUB2O95900 331 aaKnown RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 PAK4O96013 591 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 NGFP01138 241 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 GBAP04062 536 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 EDN1P05305 212 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 TROVE2P10155 538 aaKnown RBP eCLIP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 RALBP11234 206 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 CHMLP26374 656 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 NR0B1P51843 470 aaKnown RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 ACTR3P61158 418 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 NOP14P78316 857 aaKnown RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 DNAJC3Q13217 504 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 TSTA3Q13630 321 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 KRT31Q15323 416 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 SGCBQ16585 318 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 TAZQ16635 292 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 MRGPRG-AS1Q2M3A8 158 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 TMEM30BQ3MIR4 351 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 LIN9Q5TKA1 542 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 PRR5LQ6MZQ0 368 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 FAM53AQ6NSI3 398 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 ARSKQ6UWY0 536 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 LRRC70Q7Z2Q7 622 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 SPATA21Q7Z572 469 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF573Q86YE8 665 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 SLC22A9Q8IVM8 553 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 APLFQ8IW19 511 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 CDK20Q8IZL9 346 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 LEMD2Q8NC56 503 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 BHLHE23Q8NDY6 225 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 CFAP61Q8NHU2 1237 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 EXOC6Q8TAG9 804 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 DNAJA4Q8WW22 397 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-216ENST00000593223 IRGQQ8WZA9 623 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 ANKRD7Q92527 254 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 SPDL1Q96EA4 605 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 CCDC51Q96ER9 411 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 LRR1Q96L50 414 aa4.4□□□□□ -1.71
SMAD4-216ENST00000593223 RBM4Q9BWF3 364 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms