RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 KIAA1191Q96A73 305 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 TLCD1Q96CP7 247 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 LRRC46Q96FV0 321 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 PDLIM5Q96HC4 596 aaKnown RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 OR4K3Q96R72 315 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 EGFL8Q99944 293 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 PITHD1Q9GZP4 211 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 EPB41L4BQ9H329 900 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 ADAP2Q9NPF8 381 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 PRTFDC1Q9NRG1 225 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 SMYD2Q9NRG4 433 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 PNO1Q9NRX1 252 aaKnown RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 REV1Q9UBZ9 1251 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 PPIEQ9UNP9 301 aaKnown RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 ANKDD1BA6NHY2 528 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 SMIM23A6NLE4 172 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 DYRK3O43781 588 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 IFNA16P05015 189 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 HOXD4P09016 255 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-226ENST00000591534 RBP1P09455 135 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 SMIM10L1P0DMW3 83 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 KRT4P19013 534 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 CRHR1P34998 444 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 RFC3P40938 356 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 SLCO1A2P46721 670 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 KRTAP10-9P60411 292 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 MAGOHP61326 146 aaKnown RBP8.76□□□□□ -1.01
BRCA1-226ENST00000591534 PPIAP62937 165 aaKnown RBP8.76□□□□□ -1.01
BRCA1-226ENST00000591534 CDKL1Q00532 357 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 ID3Q02535 119 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 PMPCAQ10713 525 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 TBL3Q12788 808 aaKnown RBP8.76□□□□□ -1.01
BRCA1-226ENST00000591534 STX4Q12846 297 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 MYBPHQ13203 477 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 ZNF460Q14592 562 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 ELAVL1Q15717 326 aaKnown RBP8.76□□□□□ -1.01
BRCA1-226ENST00000591534 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 TRIM40Q6P9F5 258 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 TMIGD1Q6UXZ0 262 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 HSDL2Q6YN16 418 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 NCCRP1Q6ZVX7 275 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-226ENST00000591534 RAPH1Q70E73 1250 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 FGD2Q7Z6J4 655 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 TRABD2AQ86V40 505 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 ZNF227Q86WZ6 799 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 CA13Q8N1Q1 262 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 PSD4Q8NDX1 1056 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 OR10Q1Q8NGQ4 319 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 RAB3IL1Q8TBN0 382 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 RDH11Q8TC12 318 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 DCAKDQ8WVC6 231 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 CCT6BQ92526 530 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 SMIM10Q96HG1 83 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 SGCZQ96LD1 299 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 GPR22Q99680 433 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 FAM173AQ9BQD7 235 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 ROGDIQ9GZN7 287 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 NSRP1Q9H0G5 558 aaKnown RBP8.76□□□□□ -1.01
BRCA1-226ENST00000591534 COPS7BQ9H9Q2 264 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-226ENST00000591534 NECTIN3Q9NQS3 549 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 FAM53CQ9NYF3 392 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 CRIM1Q9NZV1 1036 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 KCMF1Q9P0J7 381 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 RNF6Q9Y252 685 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 SLC22A14Q9Y267 594 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 ACOT9Q9Y305 439 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 SPACA6W5XKT8 324 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 F8P00451 2351 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 C2CD3Q4AC94 2353 aa8.76□□□□□ -1.01
BRCA1-226ENST00000591534 AKAP9Q99996 3911 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 PKDREJQ9NTG1 2253 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 FAM90A27PA6NNH2 459 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 SYCE1LA8MT33 242 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 CXorf49A8MYA2 514 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-226ENST00000591534 ERI3O43414 337 aaKnown RBP8.75□□□□□ -1.01
BRCA1-226ENST00000591534 CLEC3AO75596 197 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 OR2J2O76002 312 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 PDE9AO76083 593 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 TOXO94900 526 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 SHBGP04278 402 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 PGRP06401 933 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 C1GALT1C1LP0DN25 315 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 COX7A2P14406 83 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 IGFBP2P18065 325 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 TNNI3P19429 210 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 ACVR2AP27037 513 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 ART1P52961 327 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 RAB38P57729 211 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 GPR85P60893 370 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 RAB10P61026 200 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 SERTAD2Q14140 314 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 HIST2H2ACQ16777 129 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-226ENST00000591534 GXYLT1Q4G148 440 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 UBAP2Q5T6F2 1119 aaKnown RBP8.75□□□□□ -1.01
BRCA1-226ENST00000591534 HHATQ5VTY9 493 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 HIST2H2AA3Q6FI13 130 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 OPN5Q6U736 354 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 IL20RBQ6UXL0 311 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 B3GNT6Q6ZMB0 384 aa8.75□□□□□ -1.01
BRCA1-226ENST00000591534 RTL4Q6ZR62 310 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms