RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 HTR6P50406 440 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 OLR1P78380 273 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 TBL3Q12788 808 aaKnown RBP16.75■□□□□ 0.27
VAT1-208ENST00000590924 RPTNQ6XPR3 784 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 HORMAD2Q8N7B1 307 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 ACOT4Q8N9L9 421 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 LRRC8CQ8TDW0 803 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 CHTF18Q8WVB6 975 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 CKAP2Q8WWK9 683 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 FRMD6Q96NE9 622 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 ZNF717Q9BY31 904 aaPredicted RBP16.75■□□□□ 0.27
VAT1-208ENST00000590924 HES7Q9BYE0 225 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 ACPTQ9BZG2 426 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 KLHL1Q9NR64 748 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 MS4A12Q9NXJ0 267 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 DNAJC13O75165 2243 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 APCP25054 2843 aa16.75■□□□□ 0.27
VAT1-208ENST00000590924 SLCO1B7G3V0H7 640 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 SAP18O00422 153 aaKnown RBP16.74■□□□□ 0.27
VAT1-208ENST00000590924 RGS14O43566 566 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 SH3BGRLO75368 114 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 RSL1D1O76021 490 aaKnown RBP16.74■□□□□ 0.27
VAT1-208ENST00000590924 NEURL1O76050 574 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 WISP2O76076 250 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 CASP6P55212 293 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 OCRLQ01968 901 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 OC90Q02509 493 aaPredicted RBP16.74■□□□□ 0.27
VAT1-208ENST00000590924 RUNX2Q13950 521 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 IMPG1Q17R60 797 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 KRTCAP3Q53RY4 240 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 SPIN4Q56A73 249 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 SPINK14Q6IE38 97 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 BNC2Q6ZN30 1099 aaPredicted RBP16.74■□□□□ 0.27
VAT1-208ENST00000590924 RGS9BPQ6ZS82 235 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 MRGPRGQ86SM5 289 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 NUDT13Q86X67 352 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 ZNF781Q8N8C0 355 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 FAM98AQ8NCA5 519 aaKnown RBP16.74■□□□□ 0.27
VAT1-208ENST00000590924 FAM76AQ8TAV0 307 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 TWIST2Q8WVJ9 160 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 MAGEB18Q96M61 343 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 GPR137Q96N19 417 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 PTCHD1Q96NR3 888 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 ZNF395Q9H8N7 513 aaPredicted RBP16.74■□□□□ 0.27
VAT1-208ENST00000590924 DAPP1Q9UN19 280 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 CCL27Q9Y4X3 112 aa16.74■□□□□ 0.27
VAT1-208ENST00000590924 ZNF407Q9C0G0 2248 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 IGKV3D-11A0A0A0MRZ8 115 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 A0A0G2JN53 185 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 TCRBV16S1A1N1A0A5B0 115 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 SAGE2PA6NJ88 616 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 RTCAO00442 366 aaKnown RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 PRMT3O60678 531 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 B4GALT2O60909 372 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 PRF1P14222 555 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 ST13P50502 369 aaKnown RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 HK2P52789 917 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 RAB38P57729 211 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 ALDH6A1Q02252 535 aaKnown RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 MRM1Q6IN84 353 aaKnown RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 GALNT18Q6P9A2 607 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 ZNF793Q6ZN11 406 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 Q6ZPB1 254 aaPredicted RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 GALNTL5Q7Z4T8 443 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 RPS19BP1Q86WX3 136 aaKnown RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 CA13Q8N1Q1 262 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 KIF2BQ8N4N8 673 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 C7orf57Q8NEG2 295 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 C11orf24Q96F05 449 aaPredicted RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 C7orf26Q96N11 449 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 HBEGFQ99075 208 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 MRPL1Q9BYD6 325 aaKnown RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 TUBB1Q9H4B7 451 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 CDCP1Q9H5V8 836 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 LYARQ9NX58 379 aaKnown RBP16.73■□□□□ 0.27
VAT1-208ENST00000590924 KCMF1Q9P0J7 381 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 LRFN1Q9P244 771 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 SH3BGRL2Q9UJC5 107 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 ZNF835Q9Y2P0 537 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 SPACA6W5XKT8 324 aa16.73■□□□□ 0.27
VAT1-208ENST00000590924 PHF3Q92576 2039 aaKnown RBP16.72■□□□□ 0.27
VAT1-208ENST00000590924 A0A0A6YYD5 115 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 TMEM233B4DJY2 109 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 PSMD12O00232 456 aaPredicted RBP16.72■□□□□ 0.27
VAT1-208ENST00000590924 SP1P08047 785 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 GRNP28799 593 aaKnown RBP16.72■□□□□ 0.27
VAT1-208ENST00000590924 GSTM5P46439 218 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 LIM2P55344 173 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 TRA2BP62995 288 aaKnown RBP16.72■□□□□ 0.27
VAT1-208ENST00000590924 BTG2P78543 158 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 SLAMF1Q13291 335 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 SLC25A25Q6KCM7 469 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 SCIMPQ6UWF3 145 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 Q6ZSR9 355 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 COMMD6Q7Z4G1 85 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 ARMC10Q8N2F6 343 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 MAGED4Q96JG8 741 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 RUBCNLQ9H714 662 aa16.72■□□□□ 0.27
VAT1-208ENST00000590924 TRIM45Q9H8W5 580 aaPredicted RBP16.72■□□□□ 0.27
VAT1-208ENST00000590924 PRDM9Q9NQV7 894 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms