RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NR4A2P43354 598 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 SLC9A3P48764 834 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 DPTQ07507 201 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 TARDBPQ13148 414 aaKnown RBP eCLIP17.63■□□□□ 0.41
DDX39A-206ENST00000587730 SEC23BQ15437 767 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 TMEM44Q2T9K0 475 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 DDI2Q5TDH0 399 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 C17orf64Q86WR6 236 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 CLIP4Q8N3C7 705 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 SIMC1Q8NDZ2 872 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 GPR151Q8TDV0 419 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 PHOX2BQ99453 314 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 COQ7Q99807 217 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 BARHL1Q9BZE3 327 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 RNF208Q9H0X6 261 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 MIR1-1HGQ9H1L0 117 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 TDP1Q9NUW8 608 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 TAS2R7Q9NYW3 318 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 NUP214P35658 2090 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-206ENST00000587730 DENND4CQ5VZ89 1909 aa17.63■□□□□ 0.41
DDX39A-206ENST00000587730 SLC9A3R1O14745 358 aaPredicted RBP17.62■□□□□ 0.41
DDX39A-206ENST00000587730 ADRA2AP08913 450 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 PTBP1P26599 531 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDX39A-206ENST00000587730 IFNGR2P38484 337 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 SMSP52788 366 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 EPHA5P54756 1037 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 PCBP4P57723 403 aaKnown RBP17.62■□□□□ 0.41
DDX39A-206ENST00000587730 RAB40BQ12829 278 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 DEF8Q6ZN54 512 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 USP30Q70CQ3 517 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 LAPTM4BQ86VI4 370 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 NUDT13Q86X67 352 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 TCEANCQ8N8B7 351 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 KREMEN2Q8NCW0 462 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 BBS10Q8TAM1 723 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 TM4SF18Q96CE8 201 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 KCTD7Q96MP8 289 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 MS4A8Q9BY19 250 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 SMG9Q9H0W8 520 aaKnown RBP17.62■□□□□ 0.41
DDX39A-206ENST00000587730 OR2AG1Q9H205 316 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 DDX28Q9NUL7 540 aaKnown RBP17.62■□□□□ 0.41
DDX39A-206ENST00000587730 GSTK1Q9Y2Q3 226 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 N6AMT1Q9Y5N5 214 aa17.62■□□□□ 0.41
DDX39A-206ENST00000587730 CCDC182A6NF36 153 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PLPP1O14494 284 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 CYP17A1P05093 508 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 GAAP10253 952 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 CKMT1AP12532 417 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 GJA1P17302 382 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 ST8SIA6P61647 398 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 MRPS15P82914 257 aaKnown RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PRSS53Q2L4Q9 553 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 GLYR1Q49A26 553 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PDZK1Q5T2W1 519 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 C1QTNF12Q5T7M4 302 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TNFAIP8L2Q6P589 184 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 BHLHB9Q6PI77 547 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 VN1R5Q7Z5H4 357 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 CREB3L4Q8TEY5 395 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 NUS1Q96E22 293 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 CAMK1GQ96NX5 476 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 DEFB118Q96PH6 123 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 FNDC11Q9BVV2 318 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TPK1Q9H3S4 243 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 BCL2L10Q9HD36 194 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 FGF20Q9NP95 211 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 WASH6PQ9NQA3 447 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PAK6Q9NQU5 681 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TESQ9UGI8 421 aaKnown RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 CCL26Q9Y258 94 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 EXOSC1Q9Y3B2 195 aaKnown RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 KIAA0100Q14667 2235 aaKnown RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 HMGN4O00479 90 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 SLC30A4O14863 429 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 SLC28A2O43868 658 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TRIM3O75382 744 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 HBQ1P09105 142 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TSPAN19P0C672 248 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 ERGP11308 486 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 DRD2P14416 443 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 GPR1P46091 355 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 WNT4P56705 351 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TP53BP2Q13625 1128 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TPBGQ13641 420 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 ZNF79Q15937 498 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PLK5Q496M5 336 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 RPS26P11Q5JNZ5 115 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 ENTPD8Q5MY95 495 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 LY6G5CQ5SRR4 150 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PRAMEF8Q5VWM4 474 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PRAMEF7Q5VXH5 474 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 FAM131AQ6UXB0 335 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PARS2Q7L3T8 475 aaKnown RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 PDZD3Q86UT5 571 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 SLC7A5P1Q8MH63 180 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TBC1D19Q8N5T2 526 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 LILRB4Q8NHJ6 448 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 NELL2Q99435 816 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 SLX1AQ9BQ83 275 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms