RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 LIPAP38571 399 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PCGF3Q3KNV8 242 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RTL4Q6ZR62 310 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SNX20Q7Z614 316 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GPR65Q8IYL9 337 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OXR1Q8N573 874 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CHST14Q8NCH0 376 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 IRF7Q92985 503 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SCAMP4Q969E2 229 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZHX1-C8orf76Q96EF9 292 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ELOVL6Q9H5J4 265 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RERGLQ9H628 205 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CLMPQ9H6B4 373 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 YBX2Q9Y2T7 364 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OARD1Q9Y530 152 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TMEM202A6NGA9 273 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 YY2O15391 372 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ERAL1O75616 437 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 STK16O75716 305 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 WDR47O94967 919 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TUBG1P23258 451 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RPS3AP61247 264 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CHAF1BQ13112 559 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FNDC3BQ53EP0 1204 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TCEAL5Q5H9L2 206 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TMEM31Q5JXX7 168 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ARMC6Q6NXE6 501 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RABEPKQ7Z6M1 372 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GPR149Q86SP6 731 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CACUL1Q86Y37 369 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RBFAQ8N0V3 343 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MFSD4AQ8N468 514 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 POC5Q8NA72 575 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MCFD2Q8NI22 146 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLC5A11Q8WWX8 675 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DNASE1L2Q92874 299 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LRRC3BQ96PB8 259 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR1F2PQ96R84 312 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 HTATIP2Q9BUP3 242 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 REXO4Q9GZR2 422 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TUBG2Q9NRH3 451 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 KRT84Q9NSB2 600 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 VPS9D1Q9Y2B5 631 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 BTBD3Q9Y2F9 522 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 A8MV72 311 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CYP7B1O75881 506 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SCELO95171 688 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PRKCAP17252 672 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SDC1P18827 310 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 HOXA9P31269 272 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GRK5P34947 590 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR2T5Q6IEZ7 315 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DPY19L3Q6ZPD9 716 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR2T29Q8NH02 315 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FIBINQ8TAL6 211 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 HSH2DQ96JZ2 352 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MROQ9BYG7 248 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SPHK2Q9NRA0 654 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TAS2R3Q9NYW6 316 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TNPO3Q9Y5L0 923 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 EFCAB9A8MZ26 197 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PTBP3O95758 552 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SRCP12931 536 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ITIH1P19827 911 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RGS4P49798 205 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SRP54P61011 504 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DGUOKQ16854 277 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CCSMST1Q4G0I0 132 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 NXPE1Q8N323 547 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SVOPLQ8N434 492 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GALNT11Q8NCW6 608 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR52N1Q8NH53 320 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF641Q96N77 438 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ACOT13Q9NPJ3 140 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RLIMQ9NVW2 624 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SCN3BQ9NY72 215 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RAPGEFL1Q9UHV5 662 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PPIL1Q9Y3C6 166 aa11.05□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CLIC1O00299 241 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RGS10O43665 173 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DGKAP23743 735 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GADD45AP24522 165 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLC35A2P78381 396 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PTSQ03393 145 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MESP2Q0VG99 397 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PTCHD3Q3KNS1 767 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 C2orf27AQ580R0 203 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 BRICD5Q6PL45 260 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 STK40Q8N2I9 435 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TMEM132CQ8N3T6 1108 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FAM169BQ8N8A8 192 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SPPL2AQ8TCT8 520 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PDLIM5Q96HC4 596 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SHDQ96IW2 340 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 Q96MT0 163 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 P2RY13Q9BPV8 354 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF717Q9BY31 904 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PBX4Q9BYU1 374 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms