RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 GABREP78334 506 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 BTG2P78543 158 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 SLC25A3Q00325 362 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 STX4Q12846 297 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 COL9A2Q14055 689 aaPredicted RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ERV3-1Q14264 604 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 SPATS1Q496A3 300 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 RUNDC3AQ59EK9 446 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 FAM198BQ6UWH4 519 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 TMEM64Q6YI46 380 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ZNF771Q7L3S4 317 aaPredicted RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ZNF551Q7Z340 670 aaPredicted RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 CCDC116Q8IYX3 515 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ARHGAP24Q8N264 748 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 OR8J3Q8NGG0 315 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 OR4A15Q8NGL6 344 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 SFXN5Q8TD22 340 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ZNF675Q8TD23 568 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 MR1Q95460 341 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 MOAP1Q96BY2 351 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 PTCHD1Q96NR3 888 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ANKRD27Q96NW4 1050 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 CGREF1Q99674 301 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 SH3GL1Q99961 368 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ALOXE3Q9BYJ1 711 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 RBCK1Q9BYM8 510 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 TRIM4Q9C037 500 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 CHST8Q9H2A9 424 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 MMADHCQ9H3L0 296 aaPredicted RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 SEMA3GQ9NS98 782 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 SIRT3Q9NTG7 399 aaPredicted RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 VAPAQ9P0L0 249 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 SLAMF8Q9P0V8 285 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 NTMQ9P121 344 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 CTSFQ9UBX1 484 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 GPN3Q9UHW5 284 aaPredicted RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 PRPF19Q9UMS4 504 aaKnown RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 AP3M1Q9Y2T2 418 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 PCDHB14Q9Y5E9 798 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 CFAP54Q96N23 3096 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 A0A087WV62 115 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 TCRBV16S1A1N1A0A5B0 115 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 DCDC2BA2VCK2 349 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 TGFBR3LH3BV60 316 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 CDC123O75794 336 aaPredicted RBP11.25□□□□□ -0.61
CCDC57-216ENST00000582885 CPSF4O95639 269 aaKnown RBP11.25□□□□□ -0.61
CCDC57-216ENST00000582885 C8orf89P0DMQ9 161 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 EFNA1P20827 205 aaPredicted RBP11.25□□□□□ -0.61
CCDC57-216ENST00000582885 UQCRC2P22695 453 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 SLC6A2P23975 617 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 RBMS1P29558 406 aaKnown RBP11.25□□□□□ -0.61
CCDC57-216ENST00000582885 GPC1P35052 558 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 MAGEA8P43361 318 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 STT3AP46977 705 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 PSME3P61289 254 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 PLIN5Q00G26 463 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 DUSP2Q05923 314 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 MAP4K2Q12851 820 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 RTP5Q14D33 572 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 NCF4Q15080 339 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 LCN10Q6JVE6 187 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 NANOGP8Q6NSW7 305 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 FAM180BQ6P0A1 224 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 ZNF621Q6ZSS3 439 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 TIPARPQ7Z3E1 657 aaKnown RBP11.25□□□□□ -0.61
CCDC57-216ENST00000582885 OR4N5Q8IXE1 308 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 MSRB3Q8IXL7 192 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 DEFB107AQ8IZN7 70 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 ESX1Q8N693 406 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 CTHRC1Q96CG8 243 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 ELP4Q96EB1 424 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 RBM18Q96H35 190 aaKnown RBP11.25□□□□□ -0.61
CCDC57-216ENST00000582885 ZNF578Q96N58 590 aaPredicted RBP11.25□□□□□ -0.61
CCDC57-216ENST00000582885 SPSB2Q99619 263 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 VN1R1Q9GZP7 353 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 CXorf36Q9H7Y0 433 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 AKIRIN1Q9H9L7 192 aaPredicted RBP11.25□□□□□ -0.61
CCDC57-216ENST00000582885 NANOGQ9H9S0 305 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 C3orf14Q9HBI5 128 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 NECTIN3Q9NQS3 549 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 SLC6A13Q9NSD5 602 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 SLC25A37Q9NYZ2 338 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 FOXJ2Q9P0K8 574 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 ABCD2Q9UBJ2 740 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 MKL2Q9ULH7 1088 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 CORO2BQ9UQ03 480 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 NEUROG3Q9Y4Z2 214 aa11.25□□□□□ -0.61
CCDC57-216ENST00000582885 A0A1W2PS29 197 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 IDSB3KWA1 339 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 STMND1H3BQB6 276 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 GSC2O15499 205 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 PLOD3O60568 738 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 CNOT3O75175 753 aaKnown RBP11.24□□□□□ -0.61
CCDC57-216ENST00000582885 DNAJC8O75937 253 aaPredicted RBP11.24□□□□□ -0.61
CCDC57-216ENST00000582885 GSNP06396 782 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 ABCB1P08183 1280 aaPredicted RBP11.24□□□□□ -0.61
CCDC57-216ENST00000582885 GPX2P18283 190 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 MAOAP21397 527 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 SLC5A2P31639 672 aa11.24□□□□□ -0.61
CCDC57-216ENST00000582885 CCT3P49368 545 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms