RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 ADNPQ9H2P0 1102 aa18.71■□□□□ 0.59
TOP3A-213ENST00000582230 CXorf21Q9HAI6 301 aa18.71■□□□□ 0.59
TOP3A-213ENST00000582230 TCF7L2Q9NQB0 619 aa18.71■□□□□ 0.59
TOP3A-213ENST00000582230 FGFR1OP2Q9NVK5 253 aa18.71■□□□□ 0.59
TOP3A-213ENST00000582230 ATP6V1HQ9UI12 483 aa18.71■□□□□ 0.59
TOP3A-213ENST00000582230 TUBD1Q9UJT1 453 aa18.71■□□□□ 0.59
TOP3A-213ENST00000582230 PCDHGA9Q9Y5G4 932 aaKnown RBP18.71■□□□□ 0.59
TOP3A-213ENST00000582230 A0A1W2PS29 197 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 A6NL46 340 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 GABRR3A8MPY1 467 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 SCAMP2O15127 329 aaKnown RBP18.7■□□□□ 0.58
TOP3A-213ENST00000582230 TROVE2P10155 538 aaKnown RBP eCLIP18.7■□□□□ 0.58
TOP3A-213ENST00000582230 IDO1P14902 403 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 NT5EP21589 574 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 GPR143P51810 404 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 PGDP52209 483 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 LSM12Q3MHD2 195 aaKnown RBP18.7■□□□□ 0.58
TOP3A-213ENST00000582230 GALNT12Q8IXK2 581 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 RIMKLAQ8IXN7 391 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 NATD1Q8N6N6 113 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 APCDD1LQ8NCL9 501 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 OR1N1Q8NGS0 311 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 ELP5Q8TE02 316 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 WBP1Q96G27 269 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 VMP1Q96GC9 406 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 SENP5Q96HI0 755 aaPredicted RBP18.7■□□□□ 0.58
TOP3A-213ENST00000582230 FBXL20Q96IG2 436 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 SLC25A23Q9BV35 468 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 NPHS2Q9NP85 383 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 ATAD3AQ9NVI7 634 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.7■□□□□ 0.58
TOP3A-213ENST00000582230 AIG1Q9NVV5 245 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 GPR83Q9NYM4 423 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 SH3BP4Q9P0V3 963 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 COPS7AQ9UBW8 275 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 LHX6Q9UPM6 363 aa18.7■□□□□ 0.58
TOP3A-213ENST00000582230 MYO1GB0I1T2 1018 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 UBDO15205 165 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 DDAH2O95865 285 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 ALPPP05187 535 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 ALDOCP09972 364 aaKnown RBP18.69■□□□□ 0.58
TOP3A-213ENST00000582230 ITGAMP11215 1152 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 NTSP30990 170 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 CLCN2P51788 898 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 KCNAB2Q13303 367 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 RPS6KA2Q15349 733 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 GSTA3Q16772 222 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 FAM180BQ6P0A1 224 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 DGAT2L6Q6ZPD8 337 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 CCDC116Q8IYX3 515 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 FDCSPQ8NFU4 85 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 SLC2A12Q8TD20 617 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 NCLNQ969V3 563 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 DPY30Q9C005 99 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 SEMA4CQ9C0C4 833 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 OR8D2Q9GZM6 311 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 KCNK13Q9HB14 408 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 USP24Q9UPU5 2620 aa18.69■□□□□ 0.58
TOP3A-213ENST00000582230 ZFHX4Q86UP3 3567 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 CFAP47Q6ZTR5 3102 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 CELA2AP08217 269 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 SFTPCP11686 197 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 MAP4K2Q12851 820 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 ZNF267Q14586 743 aaPredicted RBP18.68■□□□□ 0.58
TOP3A-213ENST00000582230 PRSS53Q2L4Q9 553 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 PRICKLE4Q2TBC4 344 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 CRB2Q5IJ48 1285 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 CPTPQ5TA50 214 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 AGAP7PQ5VUJ5 663 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 H3F3CQ6NXT2 135 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 KRTCAP2Q8N6L1 136 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 ZNF675Q8TD23 568 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 BRIX1Q8TDN6 353 aaKnown RBP18.68■□□□□ 0.58
TOP3A-213ENST00000582230 ZNF721Q8TF20 911 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 PSMF1Q92530 271 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 COQ8BQ96D53 544 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 AGAP4Q96P64 663 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 ZNF317Q96PQ6 595 aaPredicted RBP18.68■□□□□ 0.58
TOP3A-213ENST00000582230 EBF4Q9BQW3 602 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 CNPPD1Q9BV87 410 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 BRINP2Q9C0B6 783 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 FAM53CQ9NYF3 392 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 TEKT2Q9UIF3 430 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 DCTN4Q9UJW0 460 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 PCDHGB7Q9Y5F8 929 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 GPR45Q9Y5Y3 372 aa18.68■□□□□ 0.58
TOP3A-213ENST00000582230 TRBV11-1A0A0K0K1C0 115 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 ANKRD28O15084 1053 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 PDPK1O15530 556 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 SLITRK5O94991 958 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 IGKV3-11P04433 115 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 FAM87AP0C7U9 286 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 NCBP2P52298 156 aaKnown RBP eCLIP18.67■□□□□ 0.586e-7■□□□□ 10.1
TOP3A-213ENST00000582230 CLNS1AP54105 237 aaKnown RBP18.67■□□□□ 0.58
TOP3A-213ENST00000582230 IRX1P78414 480 aaPredicted RBP18.67■□□□□ 0.58
TOP3A-213ENST00000582230 DUSP2Q05923 314 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 FUT7Q11130 342 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 TMEM198Q66K66 360 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 ANKRD26P1Q6NSI1 321 aa18.67■□□□□ 0.58
TOP3A-213ENST00000582230 HSDL2Q6YN16 418 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms