RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ELOVL5Q9NYP7 299 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 HEY2Q9UBP5 337 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 FETUBQ9UGM5 382 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 PDE10AQ9Y233 779 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 LIPT1Q9Y234 373 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 FAM234BA2RU67 622 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 H0Y3Z8 333 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 H3BMM5 538 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 HCRTR2O43614 444 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 LDB3O75112 727 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 IGKV3-11P04433 115 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 ITGA2P17301 1181 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 PTPN6P29350 595 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 HNRNPH1P31943 449 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 PTPN7P35236 360 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 STARP49675 285 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 EEF1A1P68104 462 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 REEP5Q00765 189 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 DEFA6Q01524 100 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 SRYQ05066 204 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 PHKG1Q16816 387 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 TBCELQ5QJ74 424 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 EEF1A1P5Q5VTE0 462 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 CYB5R2Q6BCY4 276 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 ADAM5Q6NVV9 412 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 ZNF549Q6P9A3 640 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 SASS6Q6UVJ0 657 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 TMEM64Q6YI46 380 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 PPP1R21Q6ZMI0 780 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 CENPUQ71F23 418 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 MILR1Q7Z6M3 343 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 CPNE9Q8IYJ1 553 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 ZNF610Q8N9Z0 462 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 DIO2Q92813 273 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 NEUROG1Q92886 237 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 CAVIN3Q969G5 261 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 SNF8Q96H20 258 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 RILPQ96NA2 401 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 RUNDC3BQ96NL0 473 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 NPLQ9BXD5 320 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 MAPRE3Q9UPY8 281 aa6.93□□□□□ -1.3
SMARCE1-217ENST00000580654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.93□□□□□ -1.35e-7■■■□□ 18.8
SMARCE1-217ENST00000580654 URADA6NGE7 173 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 ELOA3DA6NLF2 546 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 ERI2A8K979 691 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 E5RI56 91 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 PLOD2O00469 737 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 UBFD1O14562 309 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 GNB5O14775 395 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 SSX4O60224 188 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 VAPBO95292 243 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 TBX6O95947 436 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 GAS8O95995 478 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 CD8AP01732 235 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 SERPINA6P08185 405 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 PAMP19021 973 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 TNNI3P19429 210 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 TBXA2RP21731 343 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 CCND1P24385 295 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 CHMP24386 653 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 SERPINB3P29508 390 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 RPL22P35268 128 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 RPL21P46778 160 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 LHX2P50458 406 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 RNF144AP50876 292 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 HADHBP55084 474 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 LIM2P55344 173 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 FBXW4P57775 412 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 ID2Q02363 134 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 FUT7Q11130 342 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 CTBP1Q13363 440 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 IQCB1Q15051 598 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 TOMM20Q15388 145 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 PGGHGQ32M88 737 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 ELOA3BQ3SY89 546 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 PCID2Q5JVF3 399 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 CES3Q6UWW8 571 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 LINC00114Q6XXX2 140 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 GRAMD2AQ8IUY3 354 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 DND1Q8IYX4 353 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 OTUD6BQ8N6M0 293 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 CNEP1R1Q8N9A8 125 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 ELOA3Q8NG57 546 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 OR56A3Q8NH54 315 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 SPPL2AQ8TCT8 520 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 CD200R1Q8TD46 325 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 DOK4Q8TEW6 326 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 UCN3Q969E3 161 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 NEIL2Q969S2 332 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 GAL3ST3Q96A11 431 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 MS4A6EQ96DS6 147 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 MFSD3Q96ES6 412 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 SENP5Q96HI0 755 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 TMEM41AQ96HV5 264 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 SLC39A3Q9BRY0 314 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 RHNO1Q9BSD3 238 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 HAUS8Q9BT25 410 aa6.92□□□□□ -1.3
SMARCE1-217ENST00000580654 KLHL42Q9P2K6 505 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms