RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 GUCY2DQ02846 1103 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 IFT88Q13099 833 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 ZNF791Q3KP31 576 aaPredicted RBP12.66□□□□□ -0.38
GGA3-208ENST00000579743 TMEM198Q66K66 360 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 C18orf63Q68DL7 685 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 OR52E8Q6IFG1 317 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 ZNF572Q7Z3I7 529 aaPredicted RBP12.66□□□□□ -0.38
GGA3-208ENST00000579743 GOLGA7Q7Z5G4 137 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 C9orf40Q8IXQ3 194 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 FBXW8Q8N3Y1 598 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 PAQR8Q8TEZ7 354 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 ZNF559Q9BR84 538 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 SORBS1Q9BX66 1292 aaKnown RBP12.66□□□□□ -0.38
GGA3-208ENST00000579743 ERVK-6Q9BXR3 956 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 ZFP64Q9NPA5 681 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 PNPLA3Q9NST1 481 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 TUBA8Q9NY65 449 aaPredicted RBP12.66□□□□□ -0.38
GGA3-208ENST00000579743 ERVK-19Q9WJR5 959 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 CRYBG3Q68DQ2 2970 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 C2orf92A0A1B0GVN3 265 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 CDH16O75309 829 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 SEMA3DO95025 777 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 COL6A2P12110 1019 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 KRT15P19012 456 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 CNTFP26441 200 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 BSGP35613 385 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 GMPRP36959 345 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 PIGAP37287 484 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 PEX19P40855 299 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 HNRNPH2P55795 449 aaKnown RBP12.65□□□□□ -0.38
GGA3-208ENST00000579743 NUP107P57740 925 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 SLC7A5Q01650 507 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 LGSNQ5TDP6 509 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 FRG2Q64ET8 278 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 CDH24Q86UP0 819 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 MARVELD2Q8N4S9 558 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 OR4K14Q8NGD5 310 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 TP53INP1Q96A56 240 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 JSRP1Q96MG2 331 aaPredicted RBP12.65□□□□□ -0.38
GGA3-208ENST00000579743 FRG2BQ96QU4 278 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 TTYH2Q9BSA4 534 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 DOHHQ9BU89 302 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 WWTR1Q9GZV5 400 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 ELOVL6Q9H5J4 265 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 ACSS3Q9H6R3 686 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 NOL11Q9H8H0 719 aaKnown RBP12.65□□□□□ -0.38
GGA3-208ENST00000579743 KCNN3Q9UGI6 736 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 ADAM29Q9UKF5 820 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 PSME2Q9UL46 239 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 CFL2Q9Y281 166 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 RNF11Q9Y3C5 154 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 ASB4Q9Y574 426 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 PCDHGB3Q9Y5G1 929 aa12.65□□□□□ -0.38
GGA3-208ENST00000579743 A0A0A6YYD5 115 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 A0A0G2JMM0 328 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 A0A1W2PPB8 328 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 A0A1W2PR48 441 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 A0A1W2PRS3 328 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 ESYT3A0FGR9 886 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 NKX2-6A6NCS4 301 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 GOLGA6L10A6NI86 522 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 GLOD5A6NK44 160 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 KIR3DP1A8MWS1 328 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 STX16-NPEPL1H3BU86 382 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 STX16O14662 325 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 TOXO94900 526 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 SNX4O95219 450 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 FBXO45P0C2W1 286 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 MSX1P28360 303 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 GCKP35557 465 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 SLC37A1P57057 533 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 FOXO1Q12778 655 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 MYBPHQ13203 477 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 SLC25A35Q3KQZ1 300 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 EMC4Q5J8M3 183 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 CCNYL2Q5T2Q4 361 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 C1orf185Q5T7R7 199 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 PRAMEF20Q5VT98 475 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 MRM1Q6IN84 353 aaKnown RBP12.64□□□□□ -0.39
GGA3-208ENST00000579743 MILR1Q7Z6M3 343 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 PACS2Q86VP3 889 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 CCDC71Q8IV32 467 aaPredicted RBP12.64□□□□□ -0.39
GGA3-208ENST00000579743 GALNT12Q8IXK2 581 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 RNF175Q8N4F7 328 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 PTGR2Q8N8N7 351 aaPredicted RBP12.64□□□□□ -0.39
GGA3-208ENST00000579743 DIO2Q92813 273 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 PHF21BQ96EK2 531 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 DTNBP1Q96EV8 351 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 ZNF597Q96LX8 424 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 TREX2Q9BQ50 279 aaPredicted RBP12.64□□□□□ -0.39
GGA3-208ENST00000579743 LRRC1Q9BTT6 524 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 NTMT1Q9BV86 223 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 ACKR4Q9NPB9 350 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 HRH3Q9Y5N1 445 aa12.64□□□□□ -0.39
GGA3-208ENST00000579743 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
GGA3-208ENST00000579743 ANKRD33BA6NCL7 494 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 HSPB2A8KAH6 182 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 EEDO75530 441 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms