RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SH3BP5O60239 455 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 LILRB3O75022 631 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 FHP07954 510 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 HNRNPA0Q13151 305 aaKnown RBP18.07■□□□□ 0.48
SCARF1-206ENST00000573852 C22orf42Q6IC83 251 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 USP30Q70CQ3 517 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 FAM181AQ8N9Y4 354 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 OR9Q1Q8NGQ5 310 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 CREB3L4Q8TEY5 395 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 TM4SF18Q96CE8 201 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 PLEKHB1Q9UF11 243 aaPredicted RBP18.07■□□□□ 0.48
SCARF1-206ENST00000573852 KLHL20Q9Y2M5 609 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 HMX3A6NHT5 357 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 LRRTM2O43300 516 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 CXCR2P25025 360 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 LSM11P83369 360 aaKnown RBP eCLIP18.07■□□□□ 0.48
SCARF1-206ENST00000573852 SCN1BQ07699 218 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 C1DQ13901 141 aaKnown RBP18.07■□□□□ 0.48
SCARF1-206ENST00000573852 UAP1L1Q3KQV9 507 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 LY6G5CQ5SRR4 150 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 NANOGNBQ7Z5D8 188 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 TCEAL4Q96EI5 215 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 F2RL3Q96RI0 385 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 EPHX3Q9H6B9 360 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 SIRT3Q9NTG7 399 aaPredicted RBP18.07■□□□□ 0.48
SCARF1-206ENST00000573852 ACAD8Q9UKU7 415 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 A4GNTQ9UNA3 340 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 CARD8Q9Y2G2 431 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 YARS2Q9Y2Z4 477 aaKnown RBP18.07■□□□□ 0.48
SCARF1-206ENST00000573852 CKAP5Q14008 2032 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 A0A1W2PQL4 384 aaPredicted RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 PRAMEF27A3QJZ7 478 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 AGRPO00253 132 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 C8AP07357 584 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 CSF3P09919 207 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 WEE1P30291 646 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 METAP1P53582 386 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 MAPK12P53778 367 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 SYT14P1Q58G82 188 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 PRAMEF14Q5SWL7 426 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 PRAMEF13Q5VWM6 474 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 PODNL1Q6PEZ8 512 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 PARS2Q7L3T8 475 aaKnown RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 VASH1Q7L8A9 365 aaPredicted RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 FAM129CQ86XR2 697 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 ASCC1Q8N9N2 400 aaKnown RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 PXYLP1Q8TE99 480 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 TEFMQ96QE5 360 aaKnown RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 NELL2Q99435 816 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 TTYH2Q9BSA4 534 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 SERHL2Q9H4I8 314 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 SPHK2Q9NRA0 654 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 MAFFQ9ULX9 164 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 DIMT1Q9UNQ2 313 aaKnown RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 TMEM98Q9Y2Y6 226 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 SMIM30A4D0T7 59 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 CCL16O15467 120 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 PDPK1O15530 556 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 MMP20O60882 483 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 HOXD10P28358 340 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 MADCAM1Q13477 382 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 CDK10Q15131 360 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 SYPL1Q16563 259 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 ATAT1Q5SQI0 421 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 ACSM5Q6NUN0 579 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 OLIG3Q7RTU3 272 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 ZNF547Q8IVP9 402 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 GALNT12Q8IXK2 581 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 FAM26EQ8N5C1 309 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 IL17RCQ8NAC3 791 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 UBE2E3Q969T4 207 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 MSLNLQ96KJ4 702 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 C11orf54Q9H0W9 315 aaPredicted RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 PLSCR3Q9NRY6 295 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 SEC14L3Q9UDX4 400 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 TESQ9UGI8 421 aaKnown RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 IL1AP01583 271 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 ASAH1Q13510 395 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 NFE2L1Q14494 772 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 SPDYE7PQ495Y7 208 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 CCDC149Q6ZUS6 474 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 C17orf50Q8WW18 174 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 DTD2Q96FN9 168 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 NDEL1Q9GZM8 345 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 MCOLN1Q9GZU1 580 aa18.06■□□□□ 0.48
SCARF1-206ENST00000573852 SPIN1Q9Y657 262 aaPredicted RBP18.06■□□□□ 0.48
SCARF1-206ENST00000573852 KIAA1549LQ6ZVL6 1849 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 LRRK1Q38SD2 2015 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 FABP12A6NFH5 140 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 M0R3H8 397 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 PI15O43692 258 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 NME6O75414 186 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-206ENST00000573852 APOL3O95236 402 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 CPEP16870 476 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 MMP11P24347 488 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 ACADLP28330 430 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 BSGP35613 385 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 RPS5P46782 204 aaKnown RBP18.05■□□□□ 0.48
SCARF1-206ENST00000573852 GINS1Q14691 196 aa18.05■□□□□ 0.48
SCARF1-206ENST00000573852 XKRXQ6PP77 449 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms