RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 AGAP11Q8TF27 550 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 ST8SIA4Q92187 359 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 NRGNQ92686 78 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 SPSB4Q96A44 273 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 SDCCAG3Q96C92 435 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 NEIL1Q96FI4 390 aaPredicted RBP5.88□□□□□ -1.47
PRPF8-204ENST00000572445 TSNARE1Q96NA8 513 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 ZNF285Q96NJ3 590 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 BIRC8Q96P09 236 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 GPR21Q99679 349 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 NUDT16L1Q9BRJ7 211 aaKnown RBP5.88□□□□□ -1.47
PRPF8-204ENST00000572445 UTP23Q9BRU9 249 aaKnown RBP5.88□□□□□ -1.47
PRPF8-204ENST00000572445 CHRNA10Q9GZZ6 450 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 PAIP1Q9H074 479 aaKnown RBP5.88□□□□□ -1.47
PRPF8-204ENST00000572445 ANKHQ9HCJ1 492 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 MKKSQ9NPJ1 570 aaPredicted RBP5.88□□□□□ -1.47
PRPF8-204ENST00000572445 CCDC177Q9NQR7 707 aaPredicted RBP5.88□□□□□ -1.47
PRPF8-204ENST00000572445 FAM114A2Q9NRY5 505 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 TREX1Q9NSU2 369 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 MRPS18AQ9NVS2 196 aaKnown RBP5.88□□□□□ -1.47
PRPF8-204ENST00000572445 STMN3Q9NZ72 180 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 CDC14AQ9UNH5 594 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 NAALAD2Q9Y3Q0 740 aa5.88□□□□□ -1.47
PRPF8-204ENST00000572445 NCKAP5O14513 1909 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 APCP25054 2843 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 NKX2-6A6NCS4 301 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 SYNDIG1LA6NDD5 238 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 ERI2A8K979 691 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 FAM166BA8MTA8 275 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 TARM1B6A8C7 271 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 H0Y3Z8 333 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 MYO1CO00159 1063 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 NDC80O14777 642 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 CEP104O60308 925 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 DOK2O60496 412 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 SRPX2O60687 465 aaPredicted RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 DNAJB6O75190 326 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 GUCA1CO95843 209 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 FGGP02679 453 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 GRPP07492 148 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 ZNF888P0CJ79 500 aaPredicted RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 RAP2AP10114 183 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 PKMP14618 531 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 EZRP15311 586 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 MAOAP21397 527 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 SAT1P21673 171 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 RPS3P23396 243 aaKnown RBP eCLIP5.87□□□□□ -1.471e-6■■■□□ 18
PRPF8-204ENST00000572445 ACVR2AP27037 513 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 IMPA1P29218 277 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 KRT20P35900 424 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 GDNFP39905 211 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 SLC26A3P40879 764 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 NR0B1P51843 470 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 AP2B1P63010 937 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 TLE4Q04727 773 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 ACVR1Q04771 509 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 NAE1Q13564 534 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 DHX34Q14147 1143 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 RPS6KA1Q15418 735 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 NSDHLQ15738 373 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 TSTQ16762 297 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 TYSND1Q2T9J0 566 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 DEFB134Q4QY38 66 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 ACER2Q5QJU3 275 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 ATG9BQ674R7 924 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 ZNF324BQ6AW86 544 aaPredicted RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 VN1R4Q7Z5H5 301 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 SLC26A11Q86WA9 606 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 PDSS2Q86YH6 399 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 TMEM139Q8IV31 216 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 SLC34A3Q8N130 599 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 IL17RDQ8NFM7 739 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 CEP70Q8NHQ1 597 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 ZNF775Q96BV0 537 aaPredicted RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 PYCR2Q96C36 320 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 HES6Q96HZ4 224 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 LMF1Q96S06 567 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 NPAS2Q99743 824 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 TUBB6Q9BUF5 446 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 MS4A7Q9GZW8 240 aaPredicted RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 IL22Q9GZX6 179 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 CDCP1Q9H5V8 836 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 LIN28AQ9H9Z2 209 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 SEPSECSQ9HD40 501 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 IARS2Q9NSE4 1012 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 C20orf96Q9NUD7 363 aaPredicted RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 UTP6Q9NYH9 597 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 C19orf25Q9UFG5 118 aaPredicted RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 TEKT2Q9UIF3 430 aa5.87□□□□□ -1.47
PRPF8-204ENST00000572445 TRMT6Q9UJA5 497 aaKnown RBP5.87□□□□□ -1.47
PRPF8-204ENST00000572445 AKAP9Q99996 3911 aa5.86□□□□□ -1.47
PRPF8-204ENST00000572445 CSMD2Q7Z408 3487 aa5.86□□□□□ -1.47
PRPF8-204ENST00000572445 FBN2P35556 2912 aa5.86□□□□□ -1.47
PRPF8-204ENST00000572445 ABCA4P78363 2273 aa5.86□□□□□ -1.47
PRPF8-204ENST00000572445 NINQ8N4C6 2090 aa5.86□□□□□ -1.47
PRPF8-204ENST00000572445 PHF3Q92576 2039 aaKnown RBP5.86□□□□□ -1.47
PRPF8-204ENST00000572445 IGLV3-12A0A075B6K2 115 aa5.86□□□□□ -1.47
PRPF8-204ENST00000572445 TRBV11-1A0A0K0K1C0 115 aa5.86□□□□□ -1.47
PRPF8-204ENST00000572445 PABPN1LA6NDY0 278 aaKnown RBP5.86□□□□□ -1.47
PRPF8-204ENST00000572445 ZNF785A8K8V0 405 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms