RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 VASNQ6EMK4 673 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 RNF111Q6ZNA4 994 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 LUZP2Q86TE4 346 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 C9orf106Q8NAJ2 232 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 BBOF1Q8ND07 529 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 SRFBP1Q8NEF9 429 aaKnown RBP18.16■□□□□ 0.5
CCDC40-206ENST00000572083 ZNF592Q92610 1267 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 Q96MF0 132 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 RILPQ96NA2 401 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 DACH2Q96NX9 599 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 KRT12Q99456 494 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 EFCAB11Q9BUY7 163 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 SORBS1Q9BX66 1292 aaKnown RBP18.16■□□□□ 0.5
CCDC40-206ENST00000572083 UGT2B28Q9BY64 529 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 GALNT8Q9NY28 637 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 COL6A5A8TX70 2615 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 IQANK1A0A1B0GTG1 560 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 DNALI1O14645 258 aaPredicted RBP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 ERN1O75460 977 aaKnown RBP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 SCELO95171 688 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 HPNP05981 417 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 TMIGD3P0DMS9 266 aaPredicted RBP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 BMP7P18075 431 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 CDC25BP30305 580 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 ELK3P41970 407 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 MASP1P48740 699 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 FBXW4P57775 412 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 FOXF2Q12947 444 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 ZNF267Q14586 743 aaPredicted RBP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 RPS6KA2Q15349 733 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 TOMM20Q15388 145 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 SF3B4Q15427 424 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 AP5B1Q2VPB7 878 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 EIPR1Q53HC9 387 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 SYDE1Q6ZW31 735 aaPredicted RBP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 CXXC5Q7LFL8 322 aaKnown RBP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 ZC3HC1Q86WB0 502 aaKnown RBP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 SPATA6LQ8N4H0 392 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 GRK7Q8WTQ7 553 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 SMPDL3BQ92485 455 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 WDYHV1Q96HA8 205 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 GNRHR2Q96P88 292 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 PHACTR1Q9C0D0 580 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 UBQLN3Q9H347 655 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 RPF2Q9H7B2 306 aaKnown RBP18.15■□□□□ 0.5
CCDC40-206ENST00000572083 ASIC3Q9UHC3 531 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 C15orf41Q9Y2V0 281 aa18.15■□□□□ 0.5
CCDC40-206ENST00000572083 INAFM1C9JVW0 142 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 SMPD2O60906 423 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 IL18BPO95998 194 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 TGFB1P01137 390 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 PCNAP12004 261 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 ALOX15P16050 662 aaPredicted RBP18.14■□□□□ 0.49
CCDC40-206ENST00000572083 SOX18P35713 384 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 RPL21P46778 160 aaKnown RBP18.14■□□□□ 0.49
CCDC40-206ENST00000572083 CPA2P48052 419 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 SLC37A1P57057 533 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 PDK4Q16654 411 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 WIPI1Q5MNZ9 446 aaPredicted RBP18.14■□□□□ 0.49
CCDC40-206ENST00000572083 TBCELQ5QJ74 424 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 FNDC7Q5VTL7 733 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 C18orf63Q68DL7 685 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 ZNF473Q8WTR7 871 aaKnown RBP18.14■□□□□ 0.49
CCDC40-206ENST00000572083 WDR34Q96EX3 536 aa18.14■□□□□ 0.49
CCDC40-206ENST00000572083 CNOT10Q9H9A5 744 aaKnown RBP18.14■□□□□ 0.49
CCDC40-206ENST00000572083 ANK3Q12955 4377 aaKnown RBP18.13■□□□□ 0.49
CCDC40-206ENST00000572083 ANKRD33BA6NCL7 494 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 TP53I11O14683 189 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 OR10H2O60403 315 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 STK16O75716 305 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 CLPSP04118 112 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 EPORP19235 508 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 GGT5P36269 586 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 SLCO1A2P46721 670 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 TNFRSF17Q02223 184 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 CHIT1Q13231 466 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 SLAMF1Q13291 335 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 HIST2H2ACQ16777 129 aaPredicted RBP18.13■□□□□ 0.49
CCDC40-206ENST00000572083 NHSL2Q5HYW2 709 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 PAGE2BQ5JRK9 111 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 HIST2H2AA3Q6FI13 130 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 PLXDC2Q6UX71 529 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 ZNF662Q6ZS27 426 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 ST13P4Q8IZP2 240 aaPredicted RBP18.13■□□□□ 0.49
CCDC40-206ENST00000572083 TAGAPQ8N103 731 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 TCAIMQ8N3R3 496 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 SIMC1Q8NDZ2 872 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 ABTB1Q969K4 478 aaPredicted RBP18.13■□□□□ 0.49
CCDC40-206ENST00000572083 VPS39Q96JC1 886 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 CALHM2Q9HA72 323 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 TEX10Q9NXF1 929 aaPredicted RBP18.13■□□□□ 0.49
CCDC40-206ENST00000572083 EIF3LQ9Y262 564 aaKnown RBP18.13■□□□□ 0.49
CCDC40-206ENST00000572083 HIVEP2P31629 2446 aa18.13■□□□□ 0.49
CCDC40-206ENST00000572083 TRIM64A6NGJ6 449 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 TRIM64BA6NI03 449 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 PGRMC1O00264 195 aaKnown RBP18.12■□□□□ 0.49
CCDC40-206ENST00000572083 FNTAP49354 379 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 PPP2R2BQ00005 443 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 IRF8Q02556 426 aa18.12■□□□□ 0.49
CCDC40-206ENST00000572083 LAPTM5Q13571 262 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms