RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TRIM46Q7Z4K8 759 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 OR4N5Q8IXE1 308 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 ZCCHC7Q8N3Z6 543 aaKnown RBP12.45□□□□□ -0.42
CCDC40-205ENST00000571028 RAB3IL1Q8TBN0 382 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 NR4A3Q92570 626 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 CLK4Q9HAZ1 481 aaKnown RBP12.45□□□□□ -0.42
CCDC40-205ENST00000571028 MED4Q9NPJ6 270 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 NECTIN3Q9NQS3 549 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 LYARQ9NX58 379 aaKnown RBP12.45□□□□□ -0.42
CCDC40-205ENST00000571028 KCMF1Q9P0J7 381 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 PHF11Q9UIL8 331 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 MRPS33Q9Y291 106 aaKnown RBP12.45□□□□□ -0.42
CCDC40-205ENST00000571028 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.45□□□□□ -0.42
CCDC40-205ENST00000571028 TACC2O95359 2948 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 A0A1W2PR48 441 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 SERTM1A2A2V5 107 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 DYTNA2CJ06 578 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 CYR61O00622 381 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 LDB3O75112 727 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 RSL1D1O76021 490 aaKnown RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 SCELO95171 688 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 UNC5CO95185 931 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 JUNP05412 331 aaKnown RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 ANXA4P09525 319 aaPredicted RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 C8orf89P0DMQ9 161 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 ESRRAP11474 423 aaPredicted RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 IL10P22301 178 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 TLX1P31314 330 aaPredicted RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 ALDH9A1P49189 494 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 SMSP52788 366 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 OR4D2P58180 307 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 RPL38P63173 70 aaKnown RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 INAQ16352 499 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 SPIN4Q56A73 249 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 RPUSD3Q6P087 351 aaKnown RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 Q6ZSR9 355 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 ZNF295-AS1Q8N0V1 137 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 MMP21Q8N119 569 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 ARFGAP2Q8N6H7 521 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 AMER2Q8N7J2 671 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 TUBGCP3Q96CW5 907 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 THOC3Q96J01 351 aaKnown RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 C3orf30Q96M34 536 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 NUF2Q9BZD4 464 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 RPF2Q9H7B2 306 aaKnown RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 WDR41Q9HAD4 459 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 PNO1Q9NRX1 252 aaKnown RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 TEX10Q9NXF1 929 aaPredicted RBP12.44□□□□□ -0.42
CCDC40-205ENST00000571028 ADAM29Q9UKF5 820 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 ASB4Q9Y574 426 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 HS3ST3B1Q9Y662 390 aa12.44□□□□□ -0.42
CCDC40-205ENST00000571028 SEC16AO15027 2179 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 SOCS6O14544 535 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 PROM1O43490 865 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 SNNO75324 88 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-205ENST00000571028 SEC24DO94855 1032 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-205ENST00000571028 SNUPNO95149 360 aaKnown RBP12.43□□□□□ -0.42
CCDC40-205ENST00000571028 AIFM1O95831 613 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 IFNA16P05015 189 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 NR2F6P10588 404 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 ACPPP15309 386 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 TIA1P31483 386 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC40-205ENST00000571028 BUD31P41223 144 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-205ENST00000571028 CA7P43166 264 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 TDGF1P3P51864 188 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 ARFIP1P53367 373 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 TAS2R50P59544 299 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 RAE1P78406 368 aaKnown RBP12.43□□□□□ -0.42
CCDC40-205ENST00000571028 OCRLQ01968 901 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 RHAGQ02094 409 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 TNFRSF17Q02223 184 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 ACTN3Q08043 901 aaPredicted RBP12.43□□□□□ -0.42
CCDC40-205ENST00000571028 STX4Q12846 297 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 MFAP5Q13361 173 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 SFT2D3Q587I9 215 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 MRM1Q6IN84 353 aaKnown RBP12.43□□□□□ -0.42
CCDC40-205ENST00000571028 KIRREL2Q6UWL6 708 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 ANKRD37Q7Z713 158 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 CRLF3Q8IUI8 442 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 ZNF595Q8IYB9 648 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 CATSPER1Q8NEC5 780 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 ADAMTS18Q8TE60 1221 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 CKAP2Q8WWK9 683 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 C1orf50Q9BV19 199 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 ZNF160Q9HCG1 818 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 SLCO1B3Q9NPD5 702 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 PRDM9Q9NQV7 894 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 RIC8BQ9NVN3 520 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 C1orf109Q9NX04 203 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 SEC14L3Q9UDX4 400 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 MCM8Q9UJA3 840 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 CCL27Q9Y4X3 112 aa12.43□□□□□ -0.42
CCDC40-205ENST00000571028 TRAV17A0A0B4J275 112 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 GOLGA8QA0A0J9YX86 632 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 GOLGA8OA6NCC3 632 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 GOLGA8NF8WBI6 632 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 KLF11O14901 512 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 LSM1O15116 133 aaKnown RBP12.42□□□□□ -0.42
CCDC40-205ENST00000571028 PGRMC2O15173 223 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 FGF17O60258 216 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms