RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SERPINB8P50452 374 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 SLC37A1P57057 533 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 PMPCAQ10713 525 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 TRAF3Q13114 568 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 ACAP2Q15057 778 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 GXYLT1Q4G148 440 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 PRAMEF20Q5VT98 475 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 LIPJQ5W064 366 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 TMEM64Q6YI46 380 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 FAM47EQ6ZV65 393 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 FAM109AQ8N4B1 249 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 PTGR2Q8N8N7 351 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 ZNF441Q8N8Z8 693 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 OR10G3Q8NGC4 313 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 LILRB4Q8NHJ6 448 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 CA5BP1Q8WTZ4 195 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 ISL2Q96A47 359 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 RHOXF2Q9BQY4 288 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 RUBCNLQ9H714 662 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 IPPKQ9H8X2 491 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 IL1RL2Q9HB29 575 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 SACM1LQ9NTJ5 587 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 TEX10Q9NXF1 929 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 A0A087WUV0 522 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ATP6AP2A0A1C7CYW4 349 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SYNDIG1LA6NDD5 238 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SYCE1LA8MT33 242 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 KDM4EB2RXH2 506 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 PPP6CO00743 305 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ATP6AP2O75787 350 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 GPR75O95800 540 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 FBXO45P0C2W1 286 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 FAM58BPP0C7Q3 252 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 GLI4P10075 376 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 NR2F6P10588 404 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 NF1P21359 2839 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SSTR4P31391 388 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SOX18P35713 384 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ADH7P40394 386 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SERPINB9P50453 376 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 RAP1GDS1P52306 607 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 PLIN5Q00G26 463 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 CUL3Q13618 768 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ITPR3Q14573 2671 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ZNF267Q14586 743 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 EBPQ15125 230 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 FAM83EQ2M2I3 478 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SPRED3Q2MJR0 410 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 C2CD3Q4AC94 2353 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 BICRALQ6AI39 1079 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 OPN5Q6U736 354 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 GK5Q6ZS86 529 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SLC22A16Q86VW1 577 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 LIX1LQ8IVB5 337 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ST13P4Q8IZP2 240 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 MMP21Q8N119 569 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 TMEM151AQ8N4L1 468 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 OR5L2Q8NGL0 311 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 PAQR8Q8TEZ7 354 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SLC44A1Q8WWI5 657 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 TANKQ92844 425 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SPACA9Q96E40 222 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 C14orf79Q96F83 325 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SGCZQ96LD1 299 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 PAFAH2Q99487 392 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 WWTR1Q9GZV5 400 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 VPS11Q9H270 941 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ZNF703Q9H7S9 590 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 NOL11Q9H8H0 719 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 COPS7AQ9UBW8 275 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ADGRE2Q9UHX3 823 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 PHF11Q9UIL8 331 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 PCTPQ9UKL6 214 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 CNOT11Q9UKZ1 510 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 PCDHGA11Q9Y5H2 935 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 SPACA6W5XKT8 324 aa12.75□□□□□ -0.37
GTF3C1-211ENST00000569653 ACOT7O00154 380 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 UGDHO60701 494 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 ABHD2P08910 425 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 PTX3P26022 381 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 CNTFP26441 200 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 MSX1P28360 303 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 TYK2P29597 1187 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 SSTR2P30874 369 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 CHRNB4P30926 498 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 TLE4Q04727 773 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 TESK1Q15569 626 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 NDUFAF5Q5TEU4 345 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 KLC3Q6P597 504 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 RGS9BPQ6ZS82 235 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 SEM1Q6ZVN7 128 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 PHF21BQ96EK2 531 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 GAL3ST4Q96RP7 486 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 TTYH2Q9BSA4 534 aa12.74□□□□□ -0.37
GTF3C1-211ENST00000569653 SLC6A15Q9H2J7 730 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms