RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 UBE3DQ7Z6J8 389 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 LUZP2Q86TE4 346 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 PACS2Q86VP3 889 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 OR4N5Q8IXE1 308 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 TAGAPQ8N103 731 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 C9orf106Q8NAJ2 232 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 BBOF1Q8ND07 529 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 ZPLD1Q8TCW7 415 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 PPWD1Q96BP3 646 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 PTCD3Q96EY7 689 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 WDYHV1Q96HA8 205 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 RILPQ96NA2 401 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 ZFP3Q96NJ6 502 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 EFCAB11Q9BUY7 163 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 UGT2B28Q9BY64 529 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 RPF2Q9H7B2 306 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 DNAJC11Q9NVH1 559 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 CTNNAL1Q9UBT7 734 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 NDRG3Q9UGV2 375 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 ZNF490Q9ULM2 529 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 TRIM64A6NGJ6 449 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TRIM64BA6NI03 449 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 OR6C76A6NM76 312 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 RTCAO00442 366 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 BANF1O75531 89 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 CYP4B1P13584 511 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 ALOX15P16050 662 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 FPR1P21462 350 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 SSR2P43308 183 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TMED10P49755 219 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 HERVK_113P63132 956 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 ERVK-8P63133 956 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 FOXF2Q12947 444 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 ZNF460Q14592 562 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TGFBIQ15582 683 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 SPRED3Q2MJR0 410 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 AP5B1Q2VPB7 878 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 DCST1Q5T197 706 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 RNASEH2BQ5TBB1 312 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 DGAT2L6Q6ZPD8 337 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 ST13P4Q8IZP2 240 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TCAIMQ8N3R3 496 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TRIM58Q8NG06 486 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TANKQ92844 425 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 ABTB1Q969K4 478 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 WDR34Q96EX3 536 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 VPS39Q96JC1 886 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 GNRHR2Q96P88 292 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 SECISBP2Q96T21 854 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 KRT12Q99456 494 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 CCL19Q99731 98 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TM9SF2Q99805 663 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 PELOQ9BRX2 385 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 ERVK-6Q9BXR3 956 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 MS4A8Q9BY19 250 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 PHACTR1Q9C0D0 580 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 CNOT10Q9H9A5 744 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 PRM3Q9NNZ6 103 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 SNX15Q9NRS6 342 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 MS4A12Q9NXJ0 267 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 WWOXQ9NZC7 414 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TRPS1Q9UHF7 1281 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 ADAM21Q9UKJ8 722 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 ERVK-19Q9WJR5 959 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 TESMINQ9Y4I5 508 aa10.78□□□□□ -0.68
GTF3C1-209ENST00000568569 NCF1BA6NI72 391 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 NCF1CA8MVU1 366 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 OR10H2O60403 315 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 PRAMEF4O60810 478 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 ACTL6AO96019 429 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 NCF1P14598 390 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 CD22P20273 847 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 GCKP35557 465 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 GGT5P36269 586 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 SLC37A1P57057 533 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 FBXW4P57775 412 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 RPP38P78345 283 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 LAPTM5Q13571 262 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 DOC2AQ14183 400 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 ZNF267Q14586 743 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 PDK4Q16654 411 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 CYP1B1Q16678 543 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 HIST2H2ACQ16777 129 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 MSS51Q4VC12 460 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 EIPR1Q53HC9 387 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 FNDC7Q5VTL7 733 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 PRAMEF9Q5VWM5 478 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 BICRALQ6AI39 1079 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 HIST2H2AA3Q6FI13 130 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 TRMT10BQ6PF06 316 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 IGDCC3Q8IVU1 814 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 SNX31Q8N9S9 440 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 SPPL2AQ8TCT8 520 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 PERPQ96FX8 193 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 TMEM79Q9BSE2 394 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 ANGPTL4Q9BY76 406 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 ACBD3Q9H3P7 528 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 PIGMQ9H3S5 423 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 PLAC1Q9HBJ0 212 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 LZTFL1Q9NQ48 299 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms