RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 CHPT1Q8WUD6 406 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 MCHR2Q969V1 340 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 NCLNQ969V3 563 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 RPGRIP1Q96KN7 1286 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ZNF385AQ96PM9 386 aaKnown RBP5.23□□□□□ -1.57
KARS-208ENST00000566772 TRIM6Q9C030 488 aaPredicted RBP5.23□□□□□ -1.57
KARS-208ENST00000566772 MTMR12Q9C0I1 747 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 IL36AQ9UHA7 158 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 POU2F3Q9UKI9 436 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 NIP7Q9Y221 180 aaKnown RBP eCLIP5.23□□□□□ -1.57
KARS-208ENST00000566772 LAMB4A4D0S4 1761 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ADAMTSL1Q8N6G6 1762 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 SRRM4A7MD48 611 aaKnown RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 LGALS8O00214 317 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 MBD3O95983 291 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 ATP1B1P05026 303 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 PRSS2P07478 247 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 SERPINF2P08697 491 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 HOXC6P09630 235 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 IQCF3P0C7M6 154 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 TMEM191BP0C7N4 346 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 EFNA1P20827 205 aaPredicted RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 PAX7P23759 505 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 PRKAR2BP31323 418 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 SLC6A8P48029 635 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 SSBP2P81877 361 aaPredicted RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 MAP2K1Q02750 393 aaPredicted RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 GPR50Q13585 617 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 ITGA9Q13797 1035 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 SF3B4Q15427 424 aaKnown RBP eCLIP5.22□□□□□ -1.57
KARS-208ENST00000566772 EXT1Q16394 746 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 LYPLAL1Q5VWZ2 237 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 LIPJQ5W064 366 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 HIST2H2AA3Q6FI13 130 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 TMEM64Q6YI46 380 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 CYP4V2Q6ZWL3 525 aaPredicted RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 ANO5Q75V66 913 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 EIF1ADQ8N9N8 165 aaKnown RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 SLC35C1Q96A29 364 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 TMEM45BQ96B21 275 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 SLC47A1Q96FL8 570 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 NSL1Q96IY1 281 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 C4orf45Q96LM5 186 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 NEDD4LQ96PU5 975 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 JPH2Q9BR39 696 aaPredicted RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 MRPL13Q9BYD1 178 aaKnown RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 EGLN3Q9H6Z9 239 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 GAREM1Q9H706 876 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 ZNF665Q9H7R5 613 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 SLC52A3Q9NQ40 469 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 OR1A2Q9Y585 309 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 KIF7Q2M1P5 1343 aa5.22□□□□□ -1.57
KARS-208ENST00000566772 WDR33Q9C0J8 1336 aaKnown RBP5.22□□□□□ -1.57
KARS-208ENST00000566772 COL3A1P02461 1466 aaPredicted RBP5.21□□□□□ -1.58
KARS-208ENST00000566772 PDXKO00764 312 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 PPEF2O14830 753 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 NUDT21O43809 227 aaKnown RBP5.21□□□□□ -1.58
KARS-208ENST00000566772 TBX19O60806 448 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 TSC22D2O75157 780 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 OR4F21O95013 312 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 CT45A8P0DMV1 189 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 CT45A9P0DMV2 189 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 TOP1P11387 765 aaKnown RBP5.21□□□□□ -1.58
KARS-208ENST00000566772 RPA2P15927 270 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 GDI1P31150 447 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 OTX2P32243 289 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 DLSTP36957 453 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 SLC1A3P43003 542 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 SLC1A6P48664 564 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 BEX3Q00994 111 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 MRPL28Q13084 256 aaKnown RBP5.21□□□□□ -1.58
KARS-208ENST00000566772 EXOSC7Q15024 291 aaKnown RBP5.21□□□□□ -1.58
KARS-208ENST00000566772 PDK4Q16654 411 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 ANKRD55Q3KP44 614 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 LRRC37A5PQ49AS3 106 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 CT45A2Q5DJT8 189 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 ARHGEF16Q5VV41 709 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 ZYG11AQ6WRX3 759 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 KIF6Q6ZMV9 814 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 GCNT2Q8N0V5 402 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 GPC2Q8N158 579 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 CD99L2Q8TCZ2 262 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 GANCQ8TET4 914 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 CTNNBL1Q8WYA6 563 aaPredicted RBP5.21□□□□□ -1.58
KARS-208ENST00000566772 AZIN2Q96A70 460 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 IGSF21Q96ID5 467 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 C4orf36Q96KX1 117 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 CAPNS2Q96L46 248 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 CFAP53Q96M91 514 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 AGPAT1Q99943 283 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 WDR76Q9H967 626 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 LRRC40Q9H9A6 602 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 VPS37BQ9H9H4 285 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 TM9SF3Q9HD45 589 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 PLEK2Q9NYT0 353 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 MRTO4Q9UKD2 239 aaKnown RBP5.21□□□□□ -1.58
KARS-208ENST00000566772 PILRBQ9UKJ0 227 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 MYRFQ9Y2G1 1151 aa5.21□□□□□ -1.58
KARS-208ENST00000566772 USP16Q9Y5T5 823 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms